Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.87■■□□□ 1.73
CASC1Q6TDU7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CASC1Q6TDU7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASC1Q6TDU7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASC1Q6TDU7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.86■■□□□ 1.73
CASC1Q6TDU7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASC1Q6TDU7 AC106739.1-201ENST00000617035 715 ntBASIC25.86■■□□□ 1.73
CASC1Q6TDU7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CASC1Q6TDU7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASC1Q6TDU7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CASC1Q6TDU7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 AP006587.3-201ENST00000525742 1516 ntBASIC25.85■■□□□ 1.73
CASC1Q6TDU7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.85■■□□□ 1.73
CASC1Q6TDU7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CASC1Q6TDU7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CASC1Q6TDU7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CASC1Q6TDU7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.84■■□□□ 1.73
CASC1Q6TDU7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.84■■□□□ 1.73
CASC1Q6TDU7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CASC1Q6TDU7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CASC1Q6TDU7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 SMUG1P1-201ENST00000590640 811 ntBASIC25.83■■□□□ 1.73
CASC1Q6TDU7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 AL139246.5-201ENST00000606645 996 ntBASIC25.83■■□□□ 1.73
CASC1Q6TDU7 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CASC1Q6TDU7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 AC133561.4-201ENST00000566112 224 ntBASIC25.82■■□□□ 1.72
CASC1Q6TDU7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CASC1Q6TDU7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 AF106564.1-201ENST00000607058 2553 ntBASIC25.81■■□□□ 1.72
CASC1Q6TDU7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 IGHV3-19-201ENST00000521488 291 ntBASIC25.81■■□□□ 1.72
CASC1Q6TDU7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
CASC1Q6TDU7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CASC1Q6TDU7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 AL024507.2-201ENST00000606070 2574 ntBASIC25.79■■□□□ 1.72
CASC1Q6TDU7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CASC1Q6TDU7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms