Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDPF1Q6NVV7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 YBX1P4-201ENST00000392794 808 ntBASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDPF1Q6NVV7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDPF1Q6NVV7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDPF1Q6NVV7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 AC116562.4-201ENST00000641316 2276 ntBASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 AL451085.2-201ENST00000605085 799 ntBASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.03■□□□□ 0.16
CDPF1Q6NVV7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms