Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC01554Q52M75 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
LINC01554Q52M75 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 AL032819.2-201ENST00000624543 2162 ntBASIC10.62□□□□□ -0.71
LINC01554Q52M75 OR6D1P-202ENST00000641007 5290 ntBASIC10.62□□□□□ -0.71
LINC01554Q52M75 AC020763.4-201ENST00000623414 4170 ntBASIC10.62□□□□□ -0.71
LINC01554Q52M75 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
LINC01554Q52M75 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 AGPS-202ENST00000409888 815 ntTSL 4 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
LINC01554Q52M75 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
LINC01554Q52M75 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 MED25-210ENST00000612854 801 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms