Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 OR2I1P-207ENST00000453522 948 ntBASIC16.15■□□□□ 0.18
HIST1H1AQ02539 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 AC079089.2-201ENST00000531211 1277 ntBASIC16.15■□□□□ 0.18
HIST1H1AQ02539 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 AL391422.3-201ENST00000603791 2761 ntBASIC16.15■□□□□ 0.18
HIST1H1AQ02539 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.15■□□□□ 0.18
HIST1H1AQ02539 AC068587.7-201ENST00000641602 218 ntBASIC16.15■□□□□ 0.18
HIST1H1AQ02539 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.14■□□□□ 0.18
HIST1H1AQ02539 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.14■□□□□ 0.18
HIST1H1AQ02539 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.14■□□□□ 0.18
HIST1H1AQ02539 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
HIST1H1AQ02539 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 OR7E47P-201ENST00000546390 1422 ntBASIC16.14■□□□□ 0.17
HIST1H1AQ02539 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.14■□□□□ 0.17
HIST1H1AQ02539 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 DUX4L19-201ENST00000557448 1267 ntBASIC16.13■□□□□ 0.17
HIST1H1AQ02539 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HIST1H1AQ02539 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 AF106564.1-201ENST00000607058 2553 ntBASIC16.12■□□□□ 0.17
HIST1H1AQ02539 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 SERBP1P1-201ENST00000396021 1160 ntBASIC16.12■□□□□ 0.17
HIST1H1AQ02539 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 MIR4466-201ENST00000606121 54 ntBASIC16.12■□□□□ 0.17
HIST1H1AQ02539 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 AC138932.1-201ENST00000534164 6830 ntBASIC16.12■□□□□ 0.17
HIST1H1AQ02539 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HIST1H1AQ02539 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 AC007952.6-201ENST00000573168 2673 ntBASIC16.11■□□□□ 0.17
HIST1H1AQ02539 AC003957.1-201ENST00000625108 2673 ntBASIC16.11■□□□□ 0.17
HIST1H1AQ02539 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 AC131281.2-201ENST00000520478 145 ntBASIC16.11■□□□□ 0.17
HIST1H1AQ02539 AC010525.1-201ENST00000585559 441 ntBASIC16.11■□□□□ 0.17
HIST1H1AQ02539 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H1AQ02539 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms