Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YNL046WYNL046W 519 nt4.24□□□□□ -1.73
SSL2Q00578 OPY1YBR129C 987 nt4.24□□□□□ -1.73
SSL2Q00578 NUP85YJR042W 2235 nt4.23□□□□□ -1.73
SSL2Q00578 CHD1YER164W 4407 nt4.23□□□□□ -1.73
SSL2Q00578 DSS1YMR287C 2910 nt4.23□□□□□ -1.73
SSL2Q00578 APE2YKL157W 2859 nt4.23□□□□□ -1.73
SSL2Q00578 YCR007CYCR007C 720 nt4.23□□□□□ -1.73
SSL2Q00578 MAM1YER106W 909 nt4.23□□□□□ -1.73
SSL2Q00578 RTR1YER139C 681 nt4.23□□□□□ -1.73
SSL2Q00578 YGR045CYGR045C 363 nt4.23□□□□□ -1.73
SSL2Q00578 UPF3YGR072W 1164 nt4.23□□□□□ -1.73
SSL2Q00578 YNR071CYNR071C 1029 nt4.23□□□□□ -1.73
SSL2Q00578 YBR141W-AYBR141W-A 96 nt4.23□□□□□ -1.73
SSL2Q00578 ITT1YML068W 1395 nt4.23□□□□□ -1.73
SSL2Q00578 RAD54YGL163C 2697 nt4.23□□□□□ -1.73
SSL2Q00578 YVC1YOR087W 2028 nt4.22□□□□□ -1.73
SSL2Q00578 OSH2YDL019C 3852 nt4.22□□□□□ -1.73
SSL2Q00578 AIM14YGL160W 1713 nt4.22□□□□□ -1.73
SSL2Q00578 RCR2YDR003W 633 nt4.22□□□□□ -1.73
SSL2Q00578 YDR230WYDR230W 348 nt4.22□□□□□ -1.73
SSL2Q00578 APA2YDR530C 978 nt4.22□□□□□ -1.73
SSL2Q00578 COX4YGL187C 468 nt4.22□□□□□ -1.73
SSL2Q00578 MRPL9YGR220C 810 nt4.22□□□□□ -1.73
SSL2Q00578 REE1YJL217W 597 nt4.22□□□□□ -1.73
SSL2Q00578 MRP49YKL167C 414 nt4.22□□□□□ -1.73
SSL2Q00578 TOA1YOR194C 861 nt4.22□□□□□ -1.73
SSL2Q00578 RET3YPL010W 570 nt4.22□□□□□ -1.73
SSL2Q00578 APC1YNL172W 5247 nt4.22□□□□□ -1.73
SSL2Q00578 VPS30YPL120W 1674 nt4.22□□□□□ -1.73
SSL2Q00578 LOS1YKL205W 3303 nt4.21□□□□□ -1.73
SSL2Q00578 OAF3YKR064W 2592 nt4.21□□□□□ -1.73
SSL2Q00578 OSH3YHR073W 2991 nt4.21□□□□□ -1.74
SSL2Q00578 YDR461C-AYDR461C-A 243 nt4.21□□□□□ -1.74
SSL2Q00578 YER165C-AYER165C-A 357 nt4.21□□□□□ -1.74
SSL2Q00578 YHL002C-AYHL002C-A 489 nt4.21□□□□□ -1.74
SSL2Q00578 TIM10YHR005C-A 282 nt4.21□□□□□ -1.74
SSL2Q00578 FUR1YHR128W 651 nt4.21□□□□□ -1.74
SSL2Q00578 IGO2YHR132W-A 396 nt4.21□□□□□ -1.74
SSL2Q00578 NFU1YKL040C 771 nt4.21□□□□□ -1.74
SSL2Q00578 YMR310CYMR310C 954 nt4.21□□□□□ -1.74
SSL2Q00578 YNL277W-AYNL277W-A 189 nt4.21□□□□□ -1.74
SSL2Q00578 PRM3YPL192C 402 nt4.21□□□□□ -1.74
SSL2Q00578 ARL1YBR164C 552 nt4.21□□□□□ -1.74
SSL2Q00578 SPH1YLR313C 1593 nt4.21□□□□□ -1.74
SSL2Q00578 GEM1YAL048C 1989 nt4.21□□□□□ -1.74
SSL2Q00578 TCO89YPL180W 2400 nt4.21□□□□□ -1.74
SSL2Q00578 ENP2YGR145W 2124 nt4.21□□□□□ -1.74
SSL2Q00578 SLF1YDR515W 1344 nt4.21□□□□□ -1.74
SSL2Q00578 GCN5YGR252W 1320 nt4.21□□□□□ -1.74
SSL2Q00578 YBR238CYBR238C 2196 nt4.2□□□□□ -1.74
SSL2Q00578 TMA64YDR117C 1698 nt4.2□□□□□ -1.74
SSL2Q00578 VPS17YOR132W 1656 nt4.2□□□□□ -1.74
SSL2Q00578 FRT2YAL028W 1587 nt4.2□□□□□ -1.74
SSL2Q00578 AHA1YDR214W 1053 nt4.2□□□□□ -1.74
SSL2Q00578 YGL074CYGL074C 327 nt4.2□□□□□ -1.74
SSL2Q00578 MIG2YGL209W 1149 nt4.2□□□□□ -1.74
SSL2Q00578 YHR032C-AYHR032C-A 120 nt4.2□□□□□ -1.74
SSL2Q00578 RPS4BYHR203C 786 nt4.2□□□□□ -1.74
SSL2Q00578 RSM25YIL093C 795 nt4.2□□□□□ -1.74
SSL2Q00578 YIL161WYIL161W 708 nt4.2□□□□□ -1.74
SSL2Q00578 YJL133C-AYJL133C-A 225 nt4.2□□□□□ -1.74
SSL2Q00578 RPS4AYJR145C 786 nt4.2□□□□□ -1.74
SSL2Q00578 YKL023C-AYKL023C-A 228 nt4.2□□□□□ -1.74
SSL2Q00578 SRP40YKR092C 1221 nt4.2□□□□□ -1.74
SSL2Q00578 YAL065CYAL065C 387 nt4.2□□□□□ -1.74
SSL2Q00578 IDP2YLR174W 1239 nt4.2□□□□□ -1.74
SSL2Q00578 COQ5YML110C 924 nt4.2□□□□□ -1.74
SSL2Q00578 MRPL44YMR225C 297 nt4.2□□□□□ -1.74
SSL2Q00578 YNL109WYNL109W 546 nt4.2□□□□□ -1.74
SSL2Q00578 TRM112YNR046W 408 nt4.2□□□□□ -1.74
SSL2Q00578 VPS45YGL095C 1734 nt4.2□□□□□ -1.74
SSL2Q00578 AGA1YNR044W 2178 nt4.2□□□□□ -1.74
SSL2Q00578 YFL002W-BYFL002W-B 1317 nt4.2□□□□□ -1.74
SSL2Q00578 YGR161W-AYGR161W-A 1317 nt4.2□□□□□ -1.74
SSL2Q00578 YBL100W-AYBL100W-A 1317 nt4.2□□□□□ -1.74
SSL2Q00578 YCL020WYCL020W 1317 nt4.2□□□□□ -1.74
SSL2Q00578 BUD5YCR038C 1929 nt4.19□□□□□ -1.74
SSL2Q00578 UTP25YIL091C 2166 nt4.19□□□□□ -1.74
SSL2Q00578 SEG1YMR086W 2883 nt4.19□□□□□ -1.74
SSL2Q00578 TSC13YDL015C 933 nt4.19□□□□□ -1.74
SSL2Q00578 DPP1YDR284C 870 nt4.19□□□□□ -1.74
SSL2Q00578 RMD6YEL072W 696 nt4.19□□□□□ -1.74
SSL2Q00578 PEA2YER149C 1263 nt4.19□□□□□ -1.74
SSL2Q00578 SEC53YFL045C 765 nt4.19□□□□□ -1.74
SSL2Q00578 LOC1YFR001W 615 nt4.19□□□□□ -1.74
SSL2Q00578 YJR020WYJR020W 333 nt4.19□□□□□ -1.74
SSL2Q00578 YLR050CYLR050C 486 nt4.19□□□□□ -1.74
SSL2Q00578 TSR4YOL022C 1227 nt4.19□□□□□ -1.74
SSL2Q00578 PSF3YOL146W 585 nt4.19□□□□□ -1.74
SSL2Q00578 SSM4YIL030C 3960 nt4.19□□□□□ -1.74
SSL2Q00578 PRP31YGR091W 1485 nt4.18□□□□□ -1.74
SSL2Q00578 RUD3YOR216C 1455 nt4.18□□□□□ -1.74
SSL2Q00578 ABP140YOR239W 1887 nt4.18□□□□□ -1.74
SSL2Q00578 CEX1YOR112W 2286 nt4.18□□□□□ -1.74
SSL2Q00578 NOP56YLR197W 1515 nt4.18□□□□□ -1.74
SSL2Q00578 DPB4YDR121W 591 nt4.18□□□□□ -1.74
SSL2Q00578 RGI1YER067W 486 nt4.18□□□□□ -1.74
SSL2Q00578 YOS1YER074W-A 258 nt4.18□□□□□ -1.74
SSL2Q00578 THG1YGR024C 714 nt4.18□□□□□ -1.74
SSL2Q00578 YGR051CYGR051C 324 nt4.18□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms