Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CCL20P78556 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL20P78556 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL20P78556 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.71■□□□□ 0.27
CCL20P78556 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.71■□□□□ 0.27
CCL20P78556 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CCL20P78556 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCL20P78556 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
CCL20P78556 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CCL20P78556 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL20P78556 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL20P78556 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL20P78556 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCL20P78556 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL20P78556 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCL20P78556 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL20P78556 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCL20P78556 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCL20P78556 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL20P78556 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CCL20P78556 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL20P78556 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCL20P78556 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCL20P78556 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL20P78556 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL20P78556 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL20P78556 SMG8-203ENST00000578922 2178 ntBASIC16.69■□□□□ 0.26
CCL20P78556 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL20P78556 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL20P78556 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL20P78556 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL20P78556 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 AC098818.2-201ENST00000564925 2320 ntBASIC16.68■□□□□ 0.26
CCL20P78556 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CCL20P78556 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL20P78556 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCL20P78556 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.68■□□□□ 0.26
CCL20P78556 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL20P78556 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.68■□□□□ 0.26
CCL20P78556 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
CCL20P78556 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 AC006128.1-201ENST00000624704 1661 ntBASIC16.68■□□□□ 0.26
CCL20P78556 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL20P78556 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCL20P78556 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCL20P78556 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCL20P78556 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCL20P78556 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL20P78556 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL20P78556 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL20P78556 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL20P78556 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCL20P78556 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL20P78556 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCL20P78556 AC018445.3-201ENST00000624177 1945 ntBASIC16.67■□□□□ 0.26
CCL20P78556 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL20P78556 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL20P78556 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.67■□□□□ 0.26
CCL20P78556 MIR6765-201ENST00000614092 87 ntBASIC16.67■□□□□ 0.26
CCL20P78556 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL20P78556 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms