Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.17■□□□□ 0.34
SPCS3P61009 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
SPCS3P61009 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
SPCS3P61009 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.17■□□□□ 0.34
SPCS3P61009 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.17■□□□□ 0.34
SPCS3P61009 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SPCS3P61009 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.17■□□□□ 0.34
SPCS3P61009 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.17■□□□□ 0.34
SPCS3P61009 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SPCS3P61009 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.17■□□□□ 0.34
SPCS3P61009 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.17■□□□□ 0.34
SPCS3P61009 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPCS3P61009 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS3P61009 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS3P61009 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS3P61009 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS3P61009 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.16■□□□□ 0.34
SPCS3P61009 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.16■□□□□ 0.34
SPCS3P61009 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.16■□□□□ 0.34
SPCS3P61009 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS3P61009 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS3P61009 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPCS3P61009 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 AC009299.2-201ENST00000482477 511 ntBASIC17.15■□□□□ 0.34
SPCS3P61009 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPCS3P61009 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.15■□□□□ 0.34
SPCS3P61009 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SPCS3P61009 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.15■□□□□ 0.34
SPCS3P61009 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.15■□□□□ 0.34
SPCS3P61009 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.15■□□□□ 0.34
SPCS3P61009 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.15■□□□□ 0.34
SPCS3P61009 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SPCS3P61009 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPCS3P61009 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.14■□□□□ 0.34
SPCS3P61009 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.14■□□□□ 0.33
SPCS3P61009 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SPCS3P61009 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SPCS3P61009 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SPCS3P61009 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.14■□□□□ 0.33
SPCS3P61009 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SPCS3P61009 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 AC006455.2-201ENST00000429931 906 ntBASIC17.14■□□□□ 0.33
SPCS3P61009 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.14■□□□□ 0.33
SPCS3P61009 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.14■□□□□ 0.33
SPCS3P61009 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.14■□□□□ 0.33
SPCS3P61009 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 OXCT2P1-201ENST00000447263 1535 ntBASIC17.14■□□□□ 0.33
SPCS3P61009 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SPCS3P61009 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.14■□□□□ 0.33
SPCS3P61009 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SPCS3P61009 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SPCS3P61009 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.13■□□□□ 0.33
SPCS3P61009 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.13■□□□□ 0.33
SPCS3P61009 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.13■□□□□ 0.33
SPCS3P61009 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.13■□□□□ 0.33
SPCS3P61009 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.13■□□□□ 0.33
SPCS3P61009 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SPCS3P61009 UNC93B8-201ENST00000511903 705 ntBASIC17.13■□□□□ 0.33
SPCS3P61009 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.13■□□□□ 0.33
SPCS3P61009 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.13■□□□□ 0.33
SPCS3P61009 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.13■□□□□ 0.33
SPCS3P61009 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SPCS3P61009 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SPCS3P61009 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.13■□□□□ 0.33
SPCS3P61009 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.12■□□□□ 0.33
SPCS3P61009 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SPCS3P61009 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms