Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.72■□□□□ 0.75
PSMD4P55036 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PSMD4P55036 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PSMD4P55036 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.71■□□□□ 0.75
PSMD4P55036 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PSMD4P55036 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.71■□□□□ 0.75
PSMD4P55036 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 AC027612.3-201ENST00000413684 1047 ntBASIC19.71■□□□□ 0.75
PSMD4P55036 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.71■□□□□ 0.75
PSMD4P55036 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.71■□□□□ 0.75
PSMD4P55036 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.71■□□□□ 0.75
PSMD4P55036 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.71■□□□□ 0.75
PSMD4P55036 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.71■□□□□ 0.75
PSMD4P55036 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PSMD4P55036 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.71■□□□□ 0.75
PSMD4P55036 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 AC005224.4-201ENST00000583262 1652 ntBASIC19.71■□□□□ 0.75
PSMD4P55036 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PSMD4P55036 AC244015.2-201ENST00000616358 1861 ntBASIC19.71■□□□□ 0.75
PSMD4P55036 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.7■□□□□ 0.74
PSMD4P55036 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.7■□□□□ 0.74
PSMD4P55036 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PSMD4P55036 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.7■□□□□ 0.74
PSMD4P55036 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PSMD4P55036 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PSMD4P55036 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.7■□□□□ 0.74
PSMD4P55036 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PSMD4P55036 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PSMD4P55036 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.7■□□□□ 0.74
PSMD4P55036 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.7■□□□□ 0.74
PSMD4P55036 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PSMD4P55036 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PSMD4P55036 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.7■□□□□ 0.74
PSMD4P55036 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PSMD4P55036 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.69■□□□□ 0.74
PSMD4P55036 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.69■□□□□ 0.74
PSMD4P55036 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PSMD4P55036 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PSMD4P55036 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.68■□□□□ 0.74
PSMD4P55036 MIR6084-201ENST00000622012 110 ntBASIC19.68■□□□□ 0.74
PSMD4P55036 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PSMD4P55036 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PSMD4P55036 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.67■□□□□ 0.74
PSMD4P55036 ZNRF2P3-201ENST00000424200 374 ntBASIC19.67■□□□□ 0.74
PSMD4P55036 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.67■□□□□ 0.74
PSMD4P55036 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PSMD4P55036 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PSMD4P55036 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.66■□□□□ 0.74
PSMD4P55036 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PSMD4P55036 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
PSMD4P55036 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.66■□□□□ 0.74
PSMD4P55036 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PSMD4P55036 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms