Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.6■□□□□ 0.57
CX3CR1P49238 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.6■□□□□ 0.57
CX3CR1P49238 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
CX3CR1P49238 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.6■□□□□ 0.57
CX3CR1P49238 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.6■□□□□ 0.57
CX3CR1P49238 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.6■□□□□ 0.57
CX3CR1P49238 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.6■□□□□ 0.57
CX3CR1P49238 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CX3CR1P49238 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CX3CR1P49238 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CX3CR1P49238 AC005229.4-201ENST00000610085 2198 ntBASIC18.59■□□□□ 0.57
CX3CR1P49238 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.59■□□□□ 0.57
CX3CR1P49238 PBX2P1-201ENST00000493219 1291 ntBASIC18.59■□□□□ 0.57
CX3CR1P49238 IGHV3-19-201ENST00000521488 291 ntBASIC18.59■□□□□ 0.57
CX3CR1P49238 AC133561.4-201ENST00000566112 224 ntBASIC18.59■□□□□ 0.57
CX3CR1P49238 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.59■□□□□ 0.57
CX3CR1P49238 SMUG1P1-201ENST00000590640 811 ntBASIC18.59■□□□□ 0.57
CX3CR1P49238 AC008764.7-201ENST00000593779 1081 ntBASIC18.59■□□□□ 0.57
CX3CR1P49238 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CX3CR1P49238 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CX3CR1P49238 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
CX3CR1P49238 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.58■□□□□ 0.57
CX3CR1P49238 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CX3CR1P49238 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CX3CR1P49238 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CX3CR1P49238 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CX3CR1P49238 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.58■□□□□ 0.56
CX3CR1P49238 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.58■□□□□ 0.56
CX3CR1P49238 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.58■□□□□ 0.56
CX3CR1P49238 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CX3CR1P49238 AC003102.1-202ENST00000563394 1796 ntBASIC18.58■□□□□ 0.56
CX3CR1P49238 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.57■□□□□ 0.56
CX3CR1P49238 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CX3CR1P49238 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.57■□□□□ 0.56
CX3CR1P49238 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.57■□□□□ 0.56
CX3CR1P49238 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 AP006587.3-201ENST00000525742 1516 ntBASIC18.57■□□□□ 0.56
CX3CR1P49238 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.57■□□□□ 0.56
CX3CR1P49238 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CX3CR1P49238 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.56■□□□□ 0.56
CX3CR1P49238 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CX3CR1P49238 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 AC099791.1-201ENST00000416440 715 ntBASIC18.56■□□□□ 0.56
CX3CR1P49238 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.56■□□□□ 0.56
CX3CR1P49238 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CX3CR1P49238 AC027682.1-201ENST00000562846 899 ntBASIC18.56■□□□□ 0.56
CX3CR1P49238 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.56■□□□□ 0.56
CX3CR1P49238 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CX3CR1P49238 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CX3CR1P49238 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.55■□□□□ 0.56
CX3CR1P49238 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CX3CR1P49238 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CX3CR1P49238 FEM1AP4-201ENST00000443167 1987 ntBASIC18.55■□□□□ 0.56
CX3CR1P49238 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.55■□□□□ 0.56
CX3CR1P49238 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CX3CR1P49238 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CX3CR1P49238 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CX3CR1P49238 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CX3CR1P49238 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms