Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.38■□□□□ 0.53
GDNFP39905 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GDNFP39905 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.38■□□□□ 0.53
GDNFP39905 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
GDNFP39905 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDNFP39905 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GDNFP39905 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GDNFP39905 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GDNFP39905 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GDNFP39905 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GDNFP39905 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.38■□□□□ 0.53
GDNFP39905 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.37■□□□□ 0.53
GDNFP39905 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.37■□□□□ 0.53
GDNFP39905 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.37■□□□□ 0.53
GDNFP39905 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.37■□□□□ 0.53
GDNFP39905 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
GDNFP39905 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.37■□□□□ 0.53
GDNFP39905 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 MIR3621-201ENST00000580529 85 ntBASIC18.37■□□□□ 0.53
GDNFP39905 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.37■□□□□ 0.53
GDNFP39905 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
GDNFP39905 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GDNFP39905 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.37■□□□□ 0.53
GDNFP39905 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.37■□□□□ 0.53
GDNFP39905 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GDNFP39905 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.37■□□□□ 0.53
GDNFP39905 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GDNFP39905 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GDNFP39905 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
GDNFP39905 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GDNFP39905 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.36■□□□□ 0.53
GDNFP39905 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.36■□□□□ 0.53
GDNFP39905 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.36■□□□□ 0.53
GDNFP39905 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GDNFP39905 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.36■□□□□ 0.53
GDNFP39905 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.36■□□□□ 0.53
GDNFP39905 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.36■□□□□ 0.53
GDNFP39905 C17orf82-201ENST00000623772 1530 ntBASIC18.36■□□□□ 0.53
GDNFP39905 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GDNFP39905 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
GDNFP39905 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.35■□□□□ 0.53
GDNFP39905 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GDNFP39905 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDNFP39905 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDNFP39905 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDNFP39905 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.35■□□□□ 0.53
GDNFP39905 AL356740.2-201ENST00000601559 647 ntBASIC18.35■□□□□ 0.53
GDNFP39905 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDNFP39905 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDNFP39905 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GDNFP39905 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GDNFP39905 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.35■□□□□ 0.53
GDNFP39905 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GDNFP39905 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GDNFP39905 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GDNFP39905 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
GDNFP39905 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDNFP39905 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms