Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCK1P35558 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCK1P35558 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCK1P35558 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCK1P35558 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.27■■□□□ 1.16
PCK1P35558 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.27■■□□□ 1.16
PCK1P35558 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCK1P35558 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCK1P35558 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.27■■□□□ 1.16
PCK1P35558 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCK1P35558 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCK1P35558 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.26■■□□□ 1.15
PCK1P35558 AC003102.1-202ENST00000563394 1796 ntBASIC22.26■■□□□ 1.15
PCK1P35558 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCK1P35558 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCK1P35558 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.26■■□□□ 1.15
PCK1P35558 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.26■■□□□ 1.15
PCK1P35558 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCK1P35558 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
PCK1P35558 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCK1P35558 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.26■■□□□ 1.15
PCK1P35558 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.26■■□□□ 1.15
PCK1P35558 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCK1P35558 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCK1P35558 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCK1P35558 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCK1P35558 AC009237.3-201ENST00000393279 1427 ntBASIC22.25■■□□□ 1.15
PCK1P35558 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
PCK1P35558 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.25■■□□□ 1.15
PCK1P35558 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCK1P35558 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCK1P35558 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.24■■□□□ 1.15
PCK1P35558 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCK1P35558 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.24■■□□□ 1.15
PCK1P35558 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCK1P35558 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.24■■□□□ 1.15
PCK1P35558 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCK1P35558 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.24■■□□□ 1.15
PCK1P35558 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.24■■□□□ 1.15
PCK1P35558 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.24■■□□□ 1.15
PCK1P35558 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.24■■□□□ 1.15
PCK1P35558 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.24■■□□□ 1.15
PCK1P35558 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCK1P35558 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
PCK1P35558 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCK1P35558 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCK1P35558 AC026310.3-201ENST00000625186 2373 ntBASIC22.24■■□□□ 1.15
PCK1P35558 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PCK1P35558 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCK1P35558 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCK1P35558 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
PCK1P35558 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCK1P35558 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.23■■□□□ 1.15
PCK1P35558 AC142381.2-201ENST00000566120 298 ntBASIC22.23■■□□□ 1.15
PCK1P35558 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCK1P35558 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCK1P35558 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCK1P35558 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.23■■□□□ 1.15
PCK1P35558 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCK1P35558 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.23■■□□□ 1.15
PCK1P35558 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PCK1P35558 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCK1P35558 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCK1P35558 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCK1P35558 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.22■■□□□ 1.15
PCK1P35558 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCK1P35558 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCK1P35558 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.22■■□□□ 1.15
PCK1P35558 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCK1P35558 AC005837.3-201ENST00000612163 286 ntBASIC22.22■■□□□ 1.15
PCK1P35558 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.22■■□□□ 1.15
PCK1P35558 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.22■■□□□ 1.15
PCK1P35558 Z98882.1-201ENST00000622160 2253 ntBASIC22.22■■□□□ 1.15
PCK1P35558 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCK1P35558 BX005040.4-201ENST00000637145 1518 ntBASIC22.21■■□□□ 1.15
PCK1P35558 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCK1P35558 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCK1P35558 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.21■■□□□ 1.15
PCK1P35558 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.21■■□□□ 1.15
PCK1P35558 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.21■■□□□ 1.15
PCK1P35558 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.21■■□□□ 1.15
PCK1P35558 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.21■■□□□ 1.15
PCK1P35558 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.21■■□□□ 1.15
PCK1P35558 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.21■■□□□ 1.15
PCK1P35558 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCK1P35558 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCK1P35558 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCK1P35558 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCK1P35558 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PCK1P35558 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.2■■□□□ 1.14
PCK1P35558 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms