Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHA3P29320 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHA3P29320 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 AC003102.1-202ENST00000563394 1796 ntBASIC20.6■□□□□ 0.89
EPHA3P29320 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHA3P29320 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHA3P29320 MIR3181-201ENST00000578512 73 ntBASIC20.6■□□□□ 0.89
EPHA3P29320 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
EPHA3P29320 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHA3P29320 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
EPHA3P29320 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHA3P29320 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EPHA3P29320 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
EPHA3P29320 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
EPHA3P29320 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
EPHA3P29320 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.59■□□□□ 0.89
EPHA3P29320 OR2I1P-207ENST00000453522 948 ntBASIC20.59■□□□□ 0.89
EPHA3P29320 AC010141.3-201ENST00000456659 717 ntBASIC20.59■□□□□ 0.89
EPHA3P29320 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.59■□□□□ 0.89
EPHA3P29320 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.59■□□□□ 0.89
EPHA3P29320 AC087239.1-201ENST00000622671 572 ntBASIC20.59■□□□□ 0.89
EPHA3P29320 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHA3P29320 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.58■□□□□ 0.89
EPHA3P29320 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHA3P29320 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.58■□□□□ 0.88
EPHA3P29320 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
EPHA3P29320 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHA3P29320 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EPHA3P29320 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.57■□□□□ 0.88
EPHA3P29320 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
EPHA3P29320 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
EPHA3P29320 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHA3P29320 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
EPHA3P29320 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
EPHA3P29320 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
EPHA3P29320 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHA3P29320 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 AC010525.1-201ENST00000585559 441 ntBASIC20.56■□□□□ 0.88
EPHA3P29320 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
EPHA3P29320 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
EPHA3P29320 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.56■□□□□ 0.88
EPHA3P29320 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHA3P29320 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHA3P29320 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
EPHA3P29320 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.55■□□□□ 0.88
EPHA3P29320 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHA3P29320 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA3P29320 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA3P29320 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHA3P29320 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA3P29320 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHA3P29320 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.55■□□□□ 0.88
EPHA3P29320 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EPHA3P29320 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHA3P29320 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHA3P29320 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms