Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.94■□□□□ 0.94
LAMA1P25391 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LAMA1P25391 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LAMA1P25391 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.94■□□□□ 0.94
LAMA1P25391 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.93■□□□□ 0.94
LAMA1P25391 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.93■□□□□ 0.94
LAMA1P25391 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.93■□□□□ 0.94
LAMA1P25391 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 AL162412.1-201ENST00000567129 965 ntBASIC20.93■□□□□ 0.94
LAMA1P25391 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LAMA1P25391 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.93■□□□□ 0.94
LAMA1P25391 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LAMA1P25391 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.93■□□□□ 0.94
LAMA1P25391 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.93■□□□□ 0.94
LAMA1P25391 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.93■□□□□ 0.94
LAMA1P25391 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.92■□□□□ 0.94
LAMA1P25391 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
LAMA1P25391 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA1P25391 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA1P25391 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
LAMA1P25391 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA1P25391 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.92■□□□□ 0.94
LAMA1P25391 AC016405.3-201ENST00000607710 860 ntBASIC20.92■□□□□ 0.94
LAMA1P25391 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.92■□□□□ 0.94
LAMA1P25391 AP006587.3-201ENST00000525742 1516 ntBASIC20.92■□□□□ 0.94
LAMA1P25391 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA1P25391 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LAMA1P25391 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.92■□□□□ 0.94
LAMA1P25391 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMA1P25391 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.92■□□□□ 0.94
LAMA1P25391 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LAMA1P25391 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA1P25391 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.91■□□□□ 0.94
LAMA1P25391 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA1P25391 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA1P25391 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA1P25391 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA1P25391 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.91■□□□□ 0.94
LAMA1P25391 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA1P25391 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
LAMA1P25391 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LAMA1P25391 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.91■□□□□ 0.94
LAMA1P25391 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.91■□□□□ 0.94
LAMA1P25391 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.91■□□□□ 0.94
LAMA1P25391 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.91■□□□□ 0.94
LAMA1P25391 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.9■□□□□ 0.94
LAMA1P25391 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 AC008403.3-201ENST00000598924 454 ntBASIC20.9■□□□□ 0.94
LAMA1P25391 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LAMA1P25391 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 AC097658.1-201ENST00000475555 843 ntBASIC20.9■□□□□ 0.94
LAMA1P25391 AP003097.1-201ENST00000530657 1135 ntBASIC20.9■□□□□ 0.94
LAMA1P25391 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LAMA1P25391 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMA1P25391 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LAMA1P25391 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.89■□□□□ 0.94
LAMA1P25391 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
LAMA1P25391 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.89■□□□□ 0.94
LAMA1P25391 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LAMA1P25391 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA1P25391 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA1P25391 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
LAMA1P25391 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA1P25391 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA1P25391 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA1P25391 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.89■□□□□ 0.93
LAMA1P25391 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
LAMA1P25391 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LAMA1P25391 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.89■□□□□ 0.93
LAMA1P25391 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.89■□□□□ 0.93
LAMA1P25391 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA1P25391 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.88■□□□□ 0.93
LAMA1P25391 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA1P25391 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.88■□□□□ 0.93
LAMA1P25391 AC137767.1-201ENST00000602918 1920 ntBASIC20.88■□□□□ 0.93
LAMA1P25391 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LAMA1P25391 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA1P25391 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.88■□□□□ 0.93
LAMA1P25391 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA1P25391 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.88■□□□□ 0.93
LAMA1P25391 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMA1P25391 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.88■□□□□ 0.93
LAMA1P25391 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.88■□□□□ 0.93
LAMA1P25391 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.88■□□□□ 0.93
LAMA1P25391 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LAMA1P25391 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.88■□□□□ 0.93
LAMA1P25391 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms