Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y1P22090 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y1P22090 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y1P22090 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4Y1P22090 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RPS4Y1P22090 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y1P22090 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4Y1P22090 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y1P22090 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4Y1P22090 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y1P22090 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4Y1P22090 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y1P22090 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y1P22090 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4Y1P22090 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
RPS4Y1P22090 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4Y1P22090 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4Y1P22090 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4Y1P22090 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 AC142381.2-201ENST00000566120 298 ntBASIC19.45■□□□□ 0.7
RPS4Y1P22090 TPRG1LP1-201ENST00000598702 760 ntBASIC19.45■□□□□ 0.7
RPS4Y1P22090 AL354811.1-201ENST00000610286 706 ntBASIC19.45■□□□□ 0.7
RPS4Y1P22090 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RPS4Y1P22090 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
RPS4Y1P22090 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4Y1P22090 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.43■□□□□ 0.7
RPS4Y1P22090 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 AL049796.1-201ENST00000565336 1766 ntBASIC19.43■□□□□ 0.7
RPS4Y1P22090 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.43■□□□□ 0.7
RPS4Y1P22090 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.43■□□□□ 0.7
RPS4Y1P22090 AC005837.3-201ENST00000612163 286 ntBASIC19.43■□□□□ 0.7
RPS4Y1P22090 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4Y1P22090 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms