Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20■□□□□ 0.79
NCK1P16333 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20■□□□□ 0.79
NCK1P16333 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20■□□□□ 0.79
NCK1P16333 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NCK1P16333 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCK1P16333 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NCK1P16333 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCK1P16333 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.99■□□□□ 0.79
NCK1P16333 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.99■□□□□ 0.79
NCK1P16333 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NCK1P16333 Z92544.1-202ENST00000571933 1220 ntBASIC19.99■□□□□ 0.79
NCK1P16333 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCK1P16333 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.99■□□□□ 0.79
NCK1P16333 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.99■□□□□ 0.79
NCK1P16333 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCK1P16333 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCK1P16333 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
NCK1P16333 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NCK1P16333 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.98■□□□□ 0.79
NCK1P16333 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NCK1P16333 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NCK1P16333 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NCK1P16333 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.97■□□□□ 0.79
NCK1P16333 AC241377.3-202ENST00000626088 1088 ntBASIC19.97■□□□□ 0.79
NCK1P16333 AC241585.3-202ENST00000628937 1088 ntBASIC19.97■□□□□ 0.79
NCK1P16333 AC245100.8-202ENST00000629247 1058 ntBASIC19.97■□□□□ 0.79
NCK1P16333 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NCK1P16333 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
NCK1P16333 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.97■□□□□ 0.79
NCK1P16333 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NCK1P16333 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.96■□□□□ 0.79
NCK1P16333 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NCK1P16333 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.96■□□□□ 0.79
NCK1P16333 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NCK1P16333 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NCK1P16333 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 AC239859.2-201ENST00000444165 318 ntBASIC19.96■□□□□ 0.79
NCK1P16333 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.96■□□□□ 0.79
NCK1P16333 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.96■□□□□ 0.79
NCK1P16333 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
NCK1P16333 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NCK1P16333 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.96■□□□□ 0.79
NCK1P16333 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NCK1P16333 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NCK1P16333 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
NCK1P16333 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCK1P16333 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.95■□□□□ 0.78
NCK1P16333 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
NCK1P16333 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
NCK1P16333 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCK1P16333 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCK1P16333 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.95■□□□□ 0.78
NCK1P16333 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.95■□□□□ 0.78
NCK1P16333 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NCK1P16333 AL391422.3-201ENST00000603791 2761 ntBASIC19.95■□□□□ 0.78
NCK1P16333 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NCK1P16333 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms