Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 FEM1AP1-201ENST00000431297 1995 ntBASIC18.26■□□□□ 0.51
CSF1P09603 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.26■□□□□ 0.51
CSF1P09603 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CSF1P09603 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.26■□□□□ 0.51
CSF1P09603 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.26■□□□□ 0.51
CSF1P09603 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 AC004687.1-201ENST00000579003 1625 ntBASIC18.26■□□□□ 0.51
CSF1P09603 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSF1P09603 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.25■□□□□ 0.51
CSF1P09603 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSF1P09603 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.25■□□□□ 0.51
CSF1P09603 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.25■□□□□ 0.51
CSF1P09603 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.25■□□□□ 0.51
CSF1P09603 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.25■□□□□ 0.51
CSF1P09603 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.25■□□□□ 0.51
CSF1P09603 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.25■□□□□ 0.51
CSF1P09603 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.25■□□□□ 0.51
CSF1P09603 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.25■□□□□ 0.51
CSF1P09603 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.25■□□□□ 0.51
CSF1P09603 AC005837.3-201ENST00000612163 286 ntBASIC18.25■□□□□ 0.51
CSF1P09603 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
CSF1P09603 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSF1P09603 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.24■□□□□ 0.51
CSF1P09603 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.24■□□□□ 0.51
CSF1P09603 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CSF1P09603 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSF1P09603 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.24■□□□□ 0.51
CSF1P09603 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CSF1P09603 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.23■□□□□ 0.51
CSF1P09603 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.23■□□□□ 0.51
CSF1P09603 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1P09603 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CSF1P09603 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CSF1P09603 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1P09603 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.23■□□□□ 0.51
CSF1P09603 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSF1P09603 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.22■□□□□ 0.51
CSF1P09603 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1P09603 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CSF1P09603 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CSF1P09603 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1P09603 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1P09603 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CSF1P09603 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CSF1P09603 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.22■□□□□ 0.51
CSF1P09603 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.22■□□□□ 0.51
CSF1P09603 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1P09603 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1P09603 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.22■□□□□ 0.51
CSF1P09603 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSF1P09603 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CSF1P09603 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CSF1P09603 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms