Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
HLA-DPB1P04440 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DPB1P04440 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DPB1P04440 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HLA-DPB1P04440 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19■□□□□ 0.63
HLA-DPB1P04440 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DPB1P04440 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 AC006455.2-201ENST00000429931 906 ntBASIC18.99■□□□□ 0.63
HLA-DPB1P04440 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DPB1P04440 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 AC008406.3-201ENST00000620001 1374 ntBASIC18.98■□□□□ 0.63
HLA-DPB1P04440 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 AC104564.3-201ENST00000582367 638 ntBASIC18.98■□□□□ 0.63
HLA-DPB1P04440 AC241377.3-202ENST00000626088 1088 ntBASIC18.98■□□□□ 0.63
HLA-DPB1P04440 AC241585.3-202ENST00000628937 1088 ntBASIC18.98■□□□□ 0.63
HLA-DPB1P04440 AC245100.8-202ENST00000629247 1058 ntBASIC18.98■□□□□ 0.63
HLA-DPB1P04440 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLA-DPB1P04440 LINC01006-201ENST00000333319 2292 ntBASIC18.98■□□□□ 0.63
HLA-DPB1P04440 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.97■□□□□ 0.63
HLA-DPB1P04440 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DPB1P04440 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 OXCT2P1-201ENST00000447263 1535 ntBASIC18.95■□□□□ 0.62
HLA-DPB1P04440 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DPB1P04440 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.94■□□□□ 0.62
HLA-DPB1P04440 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms