Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBC1P01850 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBC1P01850 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
TRBC1P01850 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBC1P01850 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBC1P01850 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.29■■□□□ 1
TRBC1P01850 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.29■■□□□ 1
TRBC1P01850 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
TRBC1P01850 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRBC1P01850 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBC1P01850 AC053503.5-201ENST00000601508 636 ntBASIC21.29■■□□□ 1
TRBC1P01850 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRBC1P01850 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.28■■□□□ 1
TRBC1P01850 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.28■■□□□ 1
TRBC1P01850 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.28■■□□□ 1
TRBC1P01850 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.28■■□□□ 1
TRBC1P01850 AC104564.3-201ENST00000582367 638 ntBASIC21.28■■□□□ 1
TRBC1P01850 AC104187.1-201ENST00000607510 612 ntBASIC21.28■■□□□ 1
TRBC1P01850 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.28■■□□□ 1
TRBC1P01850 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBC1P01850 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.27■■□□□ 1
TRBC1P01850 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRBC1P01850 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TRBC1P01850 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.27■■□□□ 1
TRBC1P01850 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBC1P01850 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBC1P01850 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
TRBC1P01850 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TRBC1P01850 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRBC1P01850 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBC1P01850 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBC1P01850 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBC1P01850 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBC1P01850 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRBC1P01850 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.26■□□□□ 0.99
TRBC1P01850 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.25■□□□□ 0.99
TRBC1P01850 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.25■□□□□ 0.99
TRBC1P01850 KRT19P1-201ENST00000405746 1186 ntBASIC21.25■□□□□ 0.99
TRBC1P01850 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBC1P01850 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.25■□□□□ 0.99
TRBC1P01850 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBC1P01850 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRBC1P01850 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBC1P01850 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRBC1P01850 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBC1P01850 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.24■□□□□ 0.99
TRBC1P01850 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBC1P01850 AC138907.5-202ENST00000569484 235 ntBASIC21.24■□□□□ 0.99
TRBC1P01850 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.24■□□□□ 0.99
TRBC1P01850 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
TRBC1P01850 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 FBXW4P1-201ENST00000426721 2239 ntBASIC21.24■□□□□ 0.99
TRBC1P01850 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBC1P01850 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBC1P01850 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
TRBC1P01850 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBC1P01850 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBC1P01850 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms