Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.82■■□□□ 1.4
ACTN4O43707 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.82■■□□□ 1.4
ACTN4O43707 AC027682.1-201ENST00000562846 899 ntBASIC23.82■■□□□ 1.4
ACTN4O43707 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ACTN4O43707 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ACTN4O43707 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ACTN4O43707 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ACTN4O43707 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ACTN4O43707 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
ACTN4O43707 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ACTN4O43707 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ACTN4O43707 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ACTN4O43707 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.81■■□□□ 1.4
ACTN4O43707 AL031432.3-201ENST00000607698 485 ntBASIC23.81■■□□□ 1.4
ACTN4O43707 TSPY26P-201ENST00000476365 1326 ntBASIC23.81■■□□□ 1.4
ACTN4O43707 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ACTN4O43707 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ACTN4O43707 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.8■■□□□ 1.4
ACTN4O43707 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 EDA-201ENST00000338901 1233 ntBASIC23.8■■□□□ 1.4
ACTN4O43707 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.8■■□□□ 1.4
ACTN4O43707 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.8■■□□□ 1.4
ACTN4O43707 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.8■■□□□ 1.4
ACTN4O43707 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.8■■□□□ 1.4
ACTN4O43707 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.8■■□□□ 1.4
ACTN4O43707 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACTN4O43707 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ACTN4O43707 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.79■■□□□ 1.4
ACTN4O43707 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
ACTN4O43707 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.79■■□□□ 1.4
ACTN4O43707 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ACTN4O43707 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.79■■□□□ 1.4
ACTN4O43707 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ACTN4O43707 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ACTN4O43707 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ACTN4O43707 AC055733.4-201ENST00000638462 1354 ntBASIC23.78■■□□□ 1.4
ACTN4O43707 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACTN4O43707 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.78■■□□□ 1.4
ACTN4O43707 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ACTN4O43707 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ACTN4O43707 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACTN4O43707 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.78■■□□□ 1.4
ACTN4O43707 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.78■■□□□ 1.4
ACTN4O43707 MIR939-201ENST00000401314 82 ntBASIC23.78■■□□□ 1.4
ACTN4O43707 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ACTN4O43707 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACTN4O43707 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ACTN4O43707 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
ACTN4O43707 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACTN4O43707 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.78■■□□□ 1.4
ACTN4O43707 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.78■■□□□ 1.4
ACTN4O43707 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACTN4O43707 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 AF213884.3-201ENST00000563833 479 ntBASIC23.77■■□□□ 1.4
ACTN4O43707 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
ACTN4O43707 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
ACTN4O43707 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACTN4O43707 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ACTN4O43707 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ACTN4O43707 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ACTN4O43707 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.76■■□□□ 1.39
ACTN4O43707 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.76■■□□□ 1.39
ACTN4O43707 AC105233.4-201ENST00000642045 216 ntBASIC23.76■■□□□ 1.39
ACTN4O43707 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.76■■□□□ 1.39
ACTN4O43707 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACTN4O43707 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACTN4O43707 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ACTN4O43707 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ACTN4O43707 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
ACTN4O43707 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.75■■□□□ 1.39
ACTN4O43707 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
ACTN4O43707 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
ACTN4O43707 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.75■■□□□ 1.39
ACTN4O43707 AL355001.2-201ENST00000620617 1191 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms