Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
FOXN1O15353 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
FOXN1O15353 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
FOXN1O15353 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXN1O15353 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 C1orf229-201ENST00000623686 2258 ntBASIC25.4■■□□□ 1.66
FOXN1O15353 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.4■■□□□ 1.66
FOXN1O15353 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
FOXN1O15353 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.4■■□□□ 1.66
FOXN1O15353 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
FOXN1O15353 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.4■■□□□ 1.66
FOXN1O15353 AL445228.2-201ENST00000605589 952 ntBASIC25.4■■□□□ 1.66
FOXN1O15353 AC010536.3-201ENST00000620306 533 ntBASIC25.4■■□□□ 1.66
FOXN1O15353 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
FOXN1O15353 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
FOXN1O15353 KRT87P-202ENST00000534226 1464 ntBASIC25.4■■□□□ 1.66
FOXN1O15353 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
FOXN1O15353 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
FOXN1O15353 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
FOXN1O15353 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
FOXN1O15353 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
FOXN1O15353 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.39■■□□□ 1.66
FOXN1O15353 AC097658.1-201ENST00000475555 843 ntBASIC25.39■■□□□ 1.66
FOXN1O15353 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
FOXN1O15353 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
FOXN1O15353 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.39■■□□□ 1.65
FOXN1O15353 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.39■■□□□ 1.65
FOXN1O15353 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 AC026366.1-201ENST00000488803 879 ntBASIC25.38■■□□□ 1.65
FOXN1O15353 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.38■■□□□ 1.65
FOXN1O15353 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
FOXN1O15353 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
FOXN1O15353 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXN1O15353 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.38■■□□□ 1.65
FOXN1O15353 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.37■■□□□ 1.65
FOXN1O15353 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.37■■□□□ 1.65
FOXN1O15353 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.37■■□□□ 1.65
FOXN1O15353 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
FOXN1O15353 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.37■■□□□ 1.65
FOXN1O15353 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.37■■□□□ 1.65
FOXN1O15353 CYP2T1P-201ENST00000432607 1285 ntBASIC25.37■■□□□ 1.65
FOXN1O15353 SNORA78-201ENST00000459373 127 ntBASIC25.37■■□□□ 1.65
FOXN1O15353 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.37■■□□□ 1.65
FOXN1O15353 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.37■■□□□ 1.65
FOXN1O15353 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.37■■□□□ 1.65
FOXN1O15353 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.37■■□□□ 1.65
FOXN1O15353 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
FOXN1O15353 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.37■■□□□ 1.65
FOXN1O15353 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.37■■□□□ 1.65
FOXN1O15353 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.37■■□□□ 1.65
FOXN1O15353 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.37■■□□□ 1.65
FOXN1O15353 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
FOXN1O15353 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.36■■□□□ 1.65
FOXN1O15353 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
FOXN1O15353 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.36■■□□□ 1.65
FOXN1O15353 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXN1O15353 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.36■■□□□ 1.65
FOXN1O15353 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.36■■□□□ 1.65
FOXN1O15353 AP001160.3-201ENST00000601484 763 ntBASIC25.36■■□□□ 1.65
FOXN1O15353 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
FOXN1O15353 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.36■■□□□ 1.65
FOXN1O15353 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.36■■□□□ 1.65
FOXN1O15353 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms