Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 MYCNOS-205ENST00000641950 531 ntBASIC20.68■□□□□ 0.9
PPM1DO15297 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPM1DO15297 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPM1DO15297 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPM1DO15297 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.68■□□□□ 0.9
PPM1DO15297 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPM1DO15297 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.68■□□□□ 0.9
PPM1DO15297 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.67■□□□□ 0.9
PPM1DO15297 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
PPM1DO15297 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.67■□□□□ 0.9
PPM1DO15297 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.67■□□□□ 0.9
PPM1DO15297 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.67■□□□□ 0.9
PPM1DO15297 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.67■□□□□ 0.9
PPM1DO15297 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
PPM1DO15297 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.67■□□□□ 0.9
PPM1DO15297 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPM1DO15297 AC242852.2-201ENST00000615738 1807 ntBASIC20.67■□□□□ 0.9
PPM1DO15297 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.66■□□□□ 0.9
PPM1DO15297 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PPM1DO15297 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 MIR663A-201ENST00000385250 93 ntBASIC20.66■□□□□ 0.9
PPM1DO15297 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PPM1DO15297 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.66■□□□□ 0.9
PPM1DO15297 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.66■□□□□ 0.9
PPM1DO15297 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 AC053503.5-201ENST00000601508 636 ntBASIC20.66■□□□□ 0.9
PPM1DO15297 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.66■□□□□ 0.9
PPM1DO15297 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PPM1DO15297 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPM1DO15297 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 NCF1B-203ENST00000435988 1254 ntBASIC20.65■□□□□ 0.9
PPM1DO15297 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.65■□□□□ 0.9
PPM1DO15297 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.65■□□□□ 0.9
PPM1DO15297 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.65■□□□□ 0.9
PPM1DO15297 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.65■□□□□ 0.9
PPM1DO15297 KRT18P20-201ENST00000548986 1279 ntBASIC20.65■□□□□ 0.9
PPM1DO15297 AC104771.1-201ENST00000603335 964 ntBASIC20.65■□□□□ 0.9
PPM1DO15297 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.65■□□□□ 0.9
PPM1DO15297 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPM1DO15297 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.65■□□□□ 0.9
PPM1DO15297 ECEL1P1-201ENST00000373592 1742 ntBASIC20.64■□□□□ 0.9
PPM1DO15297 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PPM1DO15297 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PPM1DO15297 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.64■□□□□ 0.89
PPM1DO15297 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.64■□□□□ 0.89
PPM1DO15297 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PPM1DO15297 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
PPM1DO15297 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPM1DO15297 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.63■□□□□ 0.89
PPM1DO15297 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PPM1DO15297 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.63■□□□□ 0.89
PPM1DO15297 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.63■□□□□ 0.89
PPM1DO15297 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PPM1DO15297 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.63■□□□□ 0.89
PPM1DO15297 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PPM1DO15297 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms