Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.14■□□□□ 0.81
CASQ2O14958 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CASQ2O14958 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.14■□□□□ 0.81
CASQ2O14958 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
CASQ2O14958 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.14■□□□□ 0.81
CASQ2O14958 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.14■□□□□ 0.81
CASQ2O14958 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
CASQ2O14958 AC018755.3-202ENST00000596210 929 ntBASIC20.14■□□□□ 0.81
CASQ2O14958 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CASQ2O14958 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CASQ2O14958 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CASQ2O14958 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.13■□□□□ 0.81
CASQ2O14958 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.13■□□□□ 0.81
CASQ2O14958 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.13■□□□□ 0.81
CASQ2O14958 AFG3L1P-217ENST00000557444 2447 ntBASIC20.13■□□□□ 0.81
CASQ2O14958 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CASQ2O14958 FP325331.1-202ENST00000623531 1380 ntBASIC20.13■□□□□ 0.81
CASQ2O14958 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 AC009086.3-201ENST00000623486 1008 ntBASIC20.13■□□□□ 0.81
CASQ2O14958 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.13■□□□□ 0.81
CASQ2O14958 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CASQ2O14958 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.12■□□□□ 0.81
CASQ2O14958 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASQ2O14958 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.12■□□□□ 0.81
CASQ2O14958 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASQ2O14958 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASQ2O14958 AC133552.2-201ENST00000619106 1032 ntBASIC20.12■□□□□ 0.81
CASQ2O14958 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.12■□□□□ 0.81
CASQ2O14958 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASQ2O14958 AL049796.1-201ENST00000565336 1766 ntBASIC20.12■□□□□ 0.81
CASQ2O14958 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.12■□□□□ 0.81
CASQ2O14958 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CASQ2O14958 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASQ2O14958 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CASQ2O14958 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CASQ2O14958 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.12■□□□□ 0.81
CASQ2O14958 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.11■□□□□ 0.81
CASQ2O14958 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.11■□□□□ 0.81
CASQ2O14958 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CASQ2O14958 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CASQ2O14958 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.11■□□□□ 0.81
CASQ2O14958 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CASQ2O14958 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CASQ2O14958 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
CASQ2O14958 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CASQ2O14958 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.11■□□□□ 0.81
CASQ2O14958 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CASQ2O14958 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CASQ2O14958 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CASQ2O14958 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CASQ2O14958 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CASQ2O14958 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CASQ2O14958 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.1■□□□□ 0.81
CASQ2O14958 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
CASQ2O14958 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CASQ2O14958 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CASQ2O14958 SPCS2P3-201ENST00000500401 656 ntBASIC20.1■□□□□ 0.81
CASQ2O14958 AC104564.3-201ENST00000582367 638 ntBASIC20.1■□□□□ 0.81
CASQ2O14958 C17orf82-201ENST00000623772 1530 ntBASIC20.1■□□□□ 0.81
CASQ2O14958 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CASQ2O14958 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CASQ2O14958 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CASQ2O14958 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CASQ2O14958 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CASQ2O14958 AC026471.6-201ENST00000622954 1905 ntBASIC20.1■□□□□ 0.81
CASQ2O14958 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 AL020996.1-203ENST00000536896 2307 ntBASIC20.09■□□□□ 0.81
CASQ2O14958 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.09■□□□□ 0.81
CASQ2O14958 AF131216.4-201ENST00000638924 1588 ntBASIC20.09■□□□□ 0.81
CASQ2O14958 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CASQ2O14958 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CASQ2O14958 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CASQ2O14958 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.09■□□□□ 0.81
CASQ2O14958 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms