Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.67■□□□□ 0.9
TAF4O00268 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 MIR4758-201ENST00000577688 71 ntBASIC20.67■□□□□ 0.9
TAF4O00268 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
TAF4O00268 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.67■□□□□ 0.9
TAF4O00268 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TAF4O00268 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.66■□□□□ 0.9
TAF4O00268 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TAF4O00268 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TAF4O00268 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
TAF4O00268 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TAF4O00268 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.66■□□□□ 0.9
TAF4O00268 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TAF4O00268 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
TAF4O00268 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.65■□□□□ 0.9
TAF4O00268 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TAF4O00268 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.65■□□□□ 0.9
TAF4O00268 AC010331.1-201ENST00000611423 582 ntBASIC20.65■□□□□ 0.9
TAF4O00268 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
TAF4O00268 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.65■□□□□ 0.9
TAF4O00268 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TAF4O00268 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TAF4O00268 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TAF4O00268 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.64■□□□□ 0.9
TAF4O00268 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TAF4O00268 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TAF4O00268 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.64■□□□□ 0.89
TAF4O00268 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.64■□□□□ 0.89
TAF4O00268 FAM210CP-201ENST00000445714 574 ntBASIC20.64■□□□□ 0.89
TAF4O00268 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.64■□□□□ 0.89
TAF4O00268 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.64■□□□□ 0.89
TAF4O00268 AC142381.4-202ENST00000563973 229 ntBASIC20.64■□□□□ 0.89
TAF4O00268 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.64■□□□□ 0.89
TAF4O00268 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.64■□□□□ 0.89
TAF4O00268 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 SLC25A24-204ENST00000569674 2357 ntBASIC20.64■□□□□ 0.89
TAF4O00268 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TAF4O00268 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.63■□□□□ 0.89
TAF4O00268 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.63■□□□□ 0.89
TAF4O00268 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TAF4O00268 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.63■□□□□ 0.89
TAF4O00268 RARRES2P4-201ENST00000514074 484 ntBASIC20.63■□□□□ 0.89
TAF4O00268 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.63■□□□□ 0.89
TAF4O00268 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.63■□□□□ 0.89
TAF4O00268 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TAF4O00268 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.62■□□□□ 0.89
TAF4O00268 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TAF4O00268 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.62■□□□□ 0.89
TAF4O00268 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.62■□□□□ 0.89
TAF4O00268 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.62■□□□□ 0.89
TAF4O00268 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.62■□□□□ 0.89
TAF4O00268 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TAF4O00268 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms