Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.83■□□□□ 0.93
C4orf47A7E2U8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.83■□□□□ 0.93
C4orf47A7E2U8 EEF1DP3-203ENST00000566025 782 ntBASIC20.83■□□□□ 0.93
C4orf47A7E2U8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.83■□□□□ 0.93
C4orf47A7E2U8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.83■□□□□ 0.93
C4orf47A7E2U8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C4orf47A7E2U8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
C4orf47A7E2U8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
C4orf47A7E2U8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 AC010980.2-201ENST00000587099 1412 ntBASIC20.82■□□□□ 0.92
C4orf47A7E2U8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 AC053503.5-201ENST00000601508 636 ntBASIC20.82■□□□□ 0.92
C4orf47A7E2U8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C4orf47A7E2U8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 AC079089.2-201ENST00000531211 1277 ntBASIC20.81■□□□□ 0.92
C4orf47A7E2U8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C4orf47A7E2U8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.8■□□□□ 0.92
C4orf47A7E2U8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.8■□□□□ 0.92
C4orf47A7E2U8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 AC120498.10-201ENST00000621827 505 ntBASIC20.79■□□□□ 0.92
C4orf47A7E2U8 AL359736.2-201ENST00000621992 437 ntBASIC20.79■□□□□ 0.92
C4orf47A7E2U8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C4orf47A7E2U8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 MIR718-201ENST00000390190 70 ntBASIC20.78■□□□□ 0.92
C4orf47A7E2U8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 AC073912.3-201ENST00000624414 853 ntBASIC20.78■□□□□ 0.92
C4orf47A7E2U8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C4orf47A7E2U8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms