Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV34A0A0B4J273 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV34A0A0B4J273 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV34A0A0B4J273 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV34A0A0B4J273 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV34A0A0B4J273 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRAV34A0A0B4J273 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV34A0A0B4J273 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 AC074183.2-201ENST00000623112 922 ntBASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV34A0A0B4J273 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV34A0A0B4J273 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV34A0A0B4J273 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 AC004987.1-201ENST00000428627 508 ntBASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TRAV34A0A0B4J273 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV34A0A0B4J273 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms