Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC187A0A096LP49 AL162412.1-201ENST00000567129 965 ntBASIC20.19■□□□□ 0.82
CCDC187A0A096LP49 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC187A0A096LP49 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC187A0A096LP49 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC187A0A096LP49 KRT16P2-201ENST00000414673 1423 ntBASIC20.19■□□□□ 0.82
CCDC187A0A096LP49 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 AL591742.1-201ENST00000604433 565 ntBASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 AC083880.1-201ENST00000608266 535 ntBASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 MYC-209ENST00000641252 345 ntBASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC187A0A096LP49 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC187A0A096LP49 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC187A0A096LP49 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 ESRRAP1-201ENST00000400596 1257 ntBASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 RBM17P2-201ENST00000616397 1405 ntBASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC187A0A096LP49 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 AC010980.2-201ENST00000587099 1412 ntBASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 AC091874.3-201ENST00000512672 1195 ntBASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC187A0A096LP49 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 AC243732.1-201ENST00000612648 864 ntBASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 AP006294.2-201ENST00000641667 209 ntBASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC187A0A096LP49 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms