Protein–RNA interactions for Protein: A0A087WXM4

Uncharacterized protein, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A087WXM4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.44■□□□□ 0.7
A0A087WXM4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.44■□□□□ 0.7
A0A087WXM4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
A0A087WXM4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.44■□□□□ 0.7
A0A087WXM4 ZNRF2P2-203ENST00000454624 420 ntBASIC19.44■□□□□ 0.7
A0A087WXM4 MIR3648-2-201ENST00000581792 180 ntBASIC19.44■□□□□ 0.7
A0A087WXM4 MIR3648-1-201ENST00000615959 180 ntBASIC19.44■□□□□ 0.7
A0A087WXM4 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.44■□□□□ 0.7
A0A087WXM4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.44■□□□□ 0.7
A0A087WXM4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.44■□□□□ 0.7
A0A087WXM4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
A0A087WXM4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
A0A087WXM4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
A0A087WXM4 AC026471.6-201ENST00000622954 1905 ntBASIC19.43■□□□□ 0.7
A0A087WXM4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
A0A087WXM4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
A0A087WXM4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
A0A087WXM4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
A0A087WXM4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
A0A087WXM4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
A0A087WXM4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.42■□□□□ 0.7
A0A087WXM4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.42■□□□□ 0.7
A0A087WXM4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
A0A087WXM4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
A0A087WXM4 AC018755.3-202ENST00000596210 929 ntBASIC19.42■□□□□ 0.7
A0A087WXM4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
A0A087WXM4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.42■□□□□ 0.7
A0A087WXM4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
A0A087WXM4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.42■□□□□ 0.7
A0A087WXM4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.42■□□□□ 0.7
A0A087WXM4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
A0A087WXM4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.41■□□□□ 0.7
A0A087WXM4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.41■□□□□ 0.7
A0A087WXM4 AC006128.1-201ENST00000624704 1661 ntBASIC19.41■□□□□ 0.7
A0A087WXM4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.41■□□□□ 0.7
A0A087WXM4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.41■□□□□ 0.7
A0A087WXM4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
A0A087WXM4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
A0A087WXM4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
A0A087WXM4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
A0A087WXM4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
A0A087WXM4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
A0A087WXM4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
A0A087WXM4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
A0A087WXM4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
A0A087WXM4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
A0A087WXM4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.4■□□□□ 0.7
A0A087WXM4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.4■□□□□ 0.7
A0A087WXM4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.4■□□□□ 0.7
A0A087WXM4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
A0A087WXM4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
A0A087WXM4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
A0A087WXM4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.39■□□□□ 0.7
A0A087WXM4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
A0A087WXM4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
A0A087WXM4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
A0A087WXM4 AC022413.1-201ENST00000624602 984 ntBASIC19.39■□□□□ 0.69
A0A087WXM4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
A0A087WXM4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
A0A087WXM4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
A0A087WXM4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms