Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 EBAG9-201ENST00000337573 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 CLCN5-203ENST00000376091 3046 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 DHX37-206ENST00000544745 4112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 AC012676.5-201ENST00000624337 1955 ntBASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 CLCC1-201ENST00000302500 1316 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 NLRP12-201ENST00000324134 3801 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 TUBD1-201ENST00000325752 2490 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 PPM1K-209ENST00000514204 2962 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 TTLL3-202ENST00000383827 4834 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 PCDHGC4-203ENST00000617094 2793 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
NPIPA3F8WFD2 EPC2-203ENST00000409654 1624 ntTSL 3 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 GABBR1-201ENST00000355973 3506 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 UBTFL8-201ENST00000426903 2112 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 PRAMEF34P-201ENST00000611860 1447 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 KCNJ3-201ENST00000295101 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 LY6G5B-208ENST00000409525 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 SF3B6-201ENST00000233468 770 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 OR51T1-201ENST00000322049 984 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 PLAUR-202ENST00000339082 1254 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 S100A1-203ENST00000368698 784 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 HIST1H2BPS1-201ENST00000369177 310 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 OR13C5-201ENST00000374779 957 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 OR51T1-202ENST00000380378 1065 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 LINC00381-201ENST00000423629 727 ntTSL 5 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 DLG3-AS1-201ENST00000424211 432 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ACTG1P21-201ENST00000431536 1000 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 BET1-205ENST00000433727 1031 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC005324.1-201ENST00000434017 746 ntTSL 3 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AL353596.1-201ENST00000447508 790 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 STAG3L1-202ENST00000456374 894 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 RN7SL424P-201ENST00000468013 289 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 RN7SL68P-201ENST00000488078 310 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 IGHV1-68-201ENST00000519437 352 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 RBM17P4-201ENST00000558517 1192 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 LINC01535-204ENST00000591116 815 ntTSL 3 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC079779.3-227ENST00000591927 860 ntTSL 5 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AL136084.3-201ENST00000605631 439 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC078841.1-201ENST00000605782 1183 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC243830.1-201ENST00000610398 455 ntTSL 3 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 IGHV2-70-201ENST00000617374 358 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC008103.1-201ENST00000623570 1181 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC073578.4-201ENST00000623945 514 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ADAMTS9-AS1-215ENST00000626014 844 ntTSL 5 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 LINC00595-210ENST00000634452 562 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 TIGD7-201ENST00000396862 3612 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 AC004801.4-201ENST00000546738 3112 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 TMEM94-202ENST00000375248 4703 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 CCT4P1-201ENST00000475327 1558 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 SEC14L1P1-201ENST00000534767 2181 ntBASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 PSMG3-AS1-203ENST00000457484 3839 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 CARD8-215ENST00000520015 1931 ntTSL 2 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ABRA-201ENST00000311955 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ABCC5-202ENST00000334444 5921 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 PCAT1-202ENST00000561978 1992 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 SETD2-209ENST00000638947 1984 ntTSL 5 BASIC10.25□□□□□ -0.77
NPIPA3F8WFD2 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 ETV6-202ENST00000396373 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AP4B1-AS1-201ENST00000419536 1734 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 PRAMEF8-203ENST00000621519 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 TACC2-228ENST00000515273 9245 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 ZNF438-205ENST00000436087 3164 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 BCL6-206ENST00000450123 2003 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 SMAD9-202ENST00000379826 5592 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 NR4A1-206ENST00000545748 3511 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 AC022613.2-201ENST00000557989 1451 ntBASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 PHTF2-203ENST00000307305 4793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 NBDY-201ENST00000374922 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 CBR3-AS1-201ENST00000413862 1543 ntTSL 5 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 ZNF627-204ENST00000588174 2755 ntTSL 2 BASIC10.24□□□□□ -0.77
NPIPA3F8WFD2 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 1347.4 ms