Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 VIT-204ENST00000401530 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 SLC12A6-207ENST00000558667 3725 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 C3orf52-201ENST00000264848 2277 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 SHANK2-AS1-201ENST00000429561 2252 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 GH1-201ENST00000323322 803 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 MIR647-201ENST00000384823 96 ntBASIC11.87□□□□□ -0.51
LMO3Q8TAP4 BET1-204ENST00000425626 601 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 ALG1L10P-201ENST00000437882 424 ntBASIC11.87□□□□□ -0.51
LMO3Q8TAP4 AL353596.1-201ENST00000447508 790 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 RN7SL825P-201ENST00000471327 295 ntBASIC11.87□□□□□ -0.51
LMO3Q8TAP4 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 AC233992.1-201ENST00000525023 444 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 AC023906.4-202ENST00000560613 823 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 LINC01882-201ENST00000589930 569 ntTSL 3 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 AC015802.4-203ENST00000592622 570 ntTSL 4 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 AP006248.1-201ENST00000610471 67 ntBASIC11.87□□□□□ -0.51
LMO3Q8TAP4 COG4-201ENST00000323786 2833 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 CNOT3-202ENST00000358389 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 PATJ-201ENST00000307297 1585 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 LRIT2-202ENST00000538192 3177 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 FP700125.1-201ENST00000628622 3262 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 LINC00665-208ENST00000591372 2732 ntTSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 SERPINB7-201ENST00000336429 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LMO3Q8TAP4 AP000552.1-201ENST00000447720 3215 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 C1orf131-202ENST00000366649 1424 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 COPA-202ENST00000368069 4664 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 SNTG1-201ENST00000517473 1703 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 PCNP-204ENST00000469941 2028 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC091167.8-201ENST00000641199 3441 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 PDE8A-208ENST00000557957 3716 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 CLEC7A-201ENST00000298523 1154 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 KCNK16-201ENST00000373227 789 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AP003551.1-201ENST00000495884 574 ntBASIC11.86□□□□□ -0.51
LMO3Q8TAP4 OR7E46P-201ENST00000503990 1019 ntBASIC11.86□□□□□ -0.51
LMO3Q8TAP4 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 IGHV3-60-201ENST00000521678 354 ntBASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC092471.1-201ENST00000536497 572 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 DUXAP9-202ENST00000549484 596 ntTSL 2 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC005479.2-201ENST00000556370 589 ntTSL 3 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC026464.4-201ENST00000570054 1284 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC012594.1-251ENST00000609666 895 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 DUXAP10-203ENST00000610531 596 ntTSL 2 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 Metazoa_SRP.40-201ENST00000611671 282 ntBASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC024288.1-201ENST00000613682 210 ntBASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC010271.2-201ENST00000614440 588 ntBASIC11.86□□□□□ -0.51
LMO3Q8TAP4 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 DDX41-219ENST00000629036 606 ntTSL 4 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 AC007241.1-202ENST00000641637 835 ntBASIC11.86□□□□□ -0.51
LMO3Q8TAP4 DAB2-202ENST00000339788 3690 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 SKP2-202ENST00000274255 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 TRO-201ENST00000173898 4647 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 UVRAG-209ENST00000533454 1823 ntTSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 FTLP10-201ENST00000503647 1501 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 FAM86B3P-202ENST00000522601 1409 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LMO3Q8TAP4 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 MUC13-205ENST00000616727 2879 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 LINC02193-203ENST00000568418 2056 ntTSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 AL031283.2-201ENST00000428747 3105 ntTSL 2 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 POLR2M-201ENST00000299638 4199 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 LINC02075-201ENST00000509950 1754 ntTSL 2 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 UHRF1-205ENST00000620565 3965 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 ATP1A3-201ENST00000302102 3597 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 SULF1-223ENST00000616868 3381 ntTSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 ZNF419-206ENST00000426954 2319 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 RELL1-202ENST00000454158 1350 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 PRKCQ-202ENST00000397176 3096 ntTSL 5 BASIC11.85□□□□□ -0.51
LMO3Q8TAP4 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms