RNA–Protein interactions for RNA: ENST00000447720.5

AP000552.1-201, humanhuman

TSL 5 BASIC

Gene AP000552.1, Length 3,215 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000552.1-201ENST00000447720 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
AP000552.1-201ENST00000447720 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
AP000552.1-201ENST00000447720 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
AP000552.1-201ENST00000447720 HRCP23327 699 aa18.72■□□□□ 0.59
AP000552.1-201ENST00000447720 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.58
AP000552.1-201ENST00000447720 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
AP000552.1-201ENST00000447720 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
AP000552.1-201ENST00000447720 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
AP000552.1-201ENST00000447720 DCAF8L2P0C7V8 631 aa18.33■□□□□ 0.53
AP000552.1-201ENST00000447720 LOC105371045A0A1W2PR82 267 aa18.17■□□□□ 0.5
AP000552.1-201ENST00000447720 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
AP000552.1-201ENST00000447720 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
AP000552.1-201ENST00000447720 DCAF1Q9Y4B6 1507 aa17.85■□□□□ 0.45
AP000552.1-201ENST00000447720 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
AP000552.1-201ENST00000447720 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
AP000552.1-201ENST00000447720 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
AP000552.1-201ENST00000447720 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
AP000552.1-201ENST00000447720 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
AP000552.1-201ENST00000447720 CCDC180Q9P1Z9 1646 aa17.54■□□□□ 0.4
AP000552.1-201ENST00000447720 TRIM41Q8WV44 630 aa17.52■□□□□ 0.39
AP000552.1-201ENST00000447720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.35■□□□□ 0.37
AP000552.1-201ENST00000447720 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
AP000552.1-201ENST00000447720 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
AP000552.1-201ENST00000447720 TTBK1Q5TCY1 1321 aaPredicted RBP17.27■□□□□ 0.35
AP000552.1-201ENST00000447720 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
AP000552.1-201ENST00000447720 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
AP000552.1-201ENST00000447720 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
AP000552.1-201ENST00000447720 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
AP000552.1-201ENST00000447720 CENPBP07199 599 aaPredicted RBP17.12■□□□□ 0.33
AP000552.1-201ENST00000447720 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
AP000552.1-201ENST00000447720 ABCC9O60706 1549 aa17.04■□□□□ 0.32
AP000552.1-201ENST00000447720 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
AP000552.1-201ENST00000447720 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
AP000552.1-201ENST00000447720 MYT1Q01538 1121 aa16.87■□□□□ 0.29
AP000552.1-201ENST00000447720 ZNF316A6NFI3 1004 aaPredicted RBP16.79■□□□□ 0.28
AP000552.1-201ENST00000447720 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
AP000552.1-201ENST00000447720 MIER1Q8N108 512 aa16.73■□□□□ 0.27
AP000552.1-201ENST00000447720 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
AP000552.1-201ENST00000447720 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
AP000552.1-201ENST00000447720 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
AP000552.1-201ENST00000447720 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
AP000552.1-201ENST00000447720 WIZO95785 1651 aa16.57■□□□□ 0.24
AP000552.1-201ENST00000447720 RANGAP1P46060 587 aaPredicted RBP16.57■□□□□ 0.24
AP000552.1-201ENST00000447720 CCDC88BA6NC98 1476 aa16.54■□□□□ 0.24
AP000552.1-201ENST00000447720 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
AP000552.1-201ENST00000447720 SOGA1O94964 1423 aa16.53■□□□□ 0.24
AP000552.1-201ENST00000447720 CSRNP3Q8WYN3 585 aa16.5■□□□□ 0.23
AP000552.1-201ENST00000447720 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
AP000552.1-201ENST00000447720 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
AP000552.1-201ENST00000447720 RUSC2Q8N2Y8 1516 aa16.42■□□□□ 0.22
AP000552.1-201ENST00000447720 APLP2Q06481 763 aa16.41■□□□□ 0.22
AP000552.1-201ENST00000447720 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
AP000552.1-201ENST00000447720 BAZ1AQ9NRL2 1556 aaPredicted RBP16.32■□□□□ 0.2
AP000552.1-201ENST00000447720 EIF4G1Q04637 1599 aaKnown RBP16.28■□□□□ 0.2
AP000552.1-201ENST00000447720 BCANQ96GW7 911 aa16.27■□□□□ 0.2
AP000552.1-201ENST00000447720 GOLGA3Q08378 1498 aa16.27■□□□□ 0.19
AP000552.1-201ENST00000447720 CLIP1P30622 1438 aa16.23■□□□□ 0.19
AP000552.1-201ENST00000447720 NACADO15069 1562 aa16.22■□□□□ 0.19
AP000552.1-201ENST00000447720 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
AP000552.1-201ENST00000447720 EEA1Q15075 1411 aa16.2■□□□□ 0.18
AP000552.1-201ENST00000447720 ITGAEP38570 1179 aa16.19■□□□□ 0.18
AP000552.1-201ENST00000447720 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
AP000552.1-201ENST00000447720 TOP2AP11388 1531 aaKnown RBP16.17■□□□□ 0.18
AP000552.1-201ENST00000447720 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
AP000552.1-201ENST00000447720 ANP32EQ9BTT0 268 aa16.15■□□□□ 0.18
AP000552.1-201ENST00000447720 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
AP000552.1-201ENST00000447720 VPS8Q8N3P4 1428 aa16.12■□□□□ 0.17
AP000552.1-201ENST00000447720 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
AP000552.1-201ENST00000447720 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
AP000552.1-201ENST00000447720 DHX57Q6P158 1386 aaKnown RBP16.09■□□□□ 0.17
AP000552.1-201ENST00000447720 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.17
AP000552.1-201ENST00000447720 FKBP8Q14318 412 aa16.07■□□□□ 0.16
AP000552.1-201ENST00000447720 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
AP000552.1-201ENST00000447720 RAPGEF2Q9Y4G8 1499 aa16.04■□□□□ 0.16
AP000552.1-201ENST00000447720 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
AP000552.1-201ENST00000447720 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
AP000552.1-201ENST00000447720 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
AP000552.1-201ENST00000447720 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
AP000552.1-201ENST00000447720 TRIM52Q96A61 297 aa15.96■□□□□ 0.14
AP000552.1-201ENST00000447720 NEFLP07196 543 aa15.94■□□□□ 0.14
AP000552.1-201ENST00000447720 KIF21BO75037 1637 aa15.94■□□□□ 0.14
AP000552.1-201ENST00000447720 SYNJ1O43426 1573 aa15.93■□□□□ 0.14
AP000552.1-201ENST00000447720 RBM19Q9Y4C8 960 aaKnown RBP15.9■□□□□ 0.14
AP000552.1-201ENST00000447720 SIN3AQ96ST3 1273 aa15.87■□□□□ 0.13
AP000552.1-201ENST00000447720 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
AP000552.1-201ENST00000447720 CCNB3Q8WWL7 1395 aa15.82■□□□□ 0.12
AP000552.1-201ENST00000447720 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
AP000552.1-201ENST00000447720 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
AP000552.1-201ENST00000447720 RAB3GAP2Q9H2M9 1393 aa15.8■□□□□ 0.12
AP000552.1-201ENST00000447720 IRX6P78412 446 aaPredicted RBP15.79■□□□□ 0.12
AP000552.1-201ENST00000447720 ARAP1Q96P48 1450 aa15.77■□□□□ 0.12
AP000552.1-201ENST00000447720 ANP32CO43423 234 aa15.76■□□□□ 0.11
AP000552.1-201ENST00000447720 ERICH6Q7L0X2 663 aa15.73■□□□□ 0.11
AP000552.1-201ENST00000447720 RRBP1Q9P2E9 1410 aaKnown RBP15.73■□□□□ 0.11
AP000552.1-201ENST00000447720 PRKCSHP14314 528 aaPredicted RBP15.71■□□□□ 0.11
AP000552.1-201ENST00000447720 MSH5O43196 834 aa15.7■□□□□ 0.1
AP000552.1-201ENST00000447720 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
AP000552.1-201ENST00000447720 P3H3Q8IVL6 736 aa15.68■□□□□ 0.1
AP000552.1-201ENST00000447720 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
AP000552.1-201ENST00000447720 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms