Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CHODL-207ENST00000543733 1637 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 TIGD7-201ENST00000396862 3612 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P04436 TLDC1-201ENST00000343629 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC10.35□□□□□ -0.75
P04436 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 ZNF587-201ENST00000339656 6882 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC10.35□□□□□ -0.75
P04436 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC10.35□□□□□ -0.75
P04436 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04436 CFAP43-202ENST00000357060 5365 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC10.34□□□□□ -0.75
P04436 ZNF57-203ENST00000523428 1774 ntTSL 2 BASIC10.34□□□□□ -0.75
P04436 ZNF550-205ENST00000457177 3376 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 YEATS4-201ENST00000247843 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 RTN3-204ENST00000354497 1407 ntTSL 2 BASIC10.34□□□□□ -0.75
P04436 SPDL1-201ENST00000265295 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 CYP8B1-202ENST00000437102 1896 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 FCRL1-201ENST00000358292 2778 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
P04436 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 MSS51-202ENST00000372912 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 PARM1-202ENST00000513238 4308 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
P04436 ARHGEF9-228ENST00000636926 5436 ntTSL 5 BASIC10.34□□□□□ -0.75
P04436 METTL22-202ENST00000381920 4984 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
P04436 ZNF674-201ENST00000414387 2274 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
P04436 HBD-201ENST00000292901 486 ntTSL 3 BASIC10.34□□□□□ -0.75
P04436 DEFA1-201ENST00000382679 406 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 AL353133.2-201ENST00000402173 411 ntBASIC10.34□□□□□ -0.75
P04436 SUPT4H1P1-201ENST00000423067 340 ntBASIC10.34□□□□□ -0.75
P04436 LINC01517-201ENST00000426922 980 ntTSL 5 BASIC10.34□□□□□ -0.75
P04436 LRTOMT-208ENST00000439209 801 ntTSL 3 BASIC10.34□□□□□ -0.75
P04436 ACP1-207ENST00000439645 605 ntTSL 2 BASIC10.34□□□□□ -0.75
P04436 SLC25A5P1-201ENST00000450250 898 ntBASIC10.34□□□□□ -0.75
P04436 RPS19P7-201ENST00000455650 396 ntBASIC10.34□□□□□ -0.75
P04436 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC10.34□□□□□ -0.75
P04436 AC022121.1-201ENST00000484584 579 ntBASIC10.34□□□□□ -0.75
P04436 AF107885.1-201ENST00000498401 958 ntBASIC10.34□□□□□ -0.75
P04436 SNORA31.7-201ENST00000516287 135 ntBASIC10.34□□□□□ -0.75
P04436 AAMDC-211ENST00000533193 606 ntTSL 5 BASIC10.34□□□□□ -0.75
P04436 AC136475.5-201ENST00000534483 827 ntTSL 5 BASIC10.34□□□□□ -0.75
P04436 TRPT1-215ENST00000546089 684 ntTSL 3 BASIC10.34□□□□□ -0.75
P04436 OAZ2-205ENST00000559753 785 ntTSL 2 BASIC10.34□□□□□ -0.75
P04436 TBC1D21-203ENST00000562056 965 ntTSL 5 BASIC10.34□□□□□ -0.75
P04436 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
P04436 AL592211.1-201ENST00000594418 497 ntBASIC10.34□□□□□ -0.75
P04436 AC078841.1-201ENST00000605782 1183 ntBASIC10.34□□□□□ -0.75
P04436 SEMA4G-212ENST00000613292 1171 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 LYZL6-203ENST00000618542 917 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 AC243547.3-202ENST00000625258 192 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04436 RBMX2-205ENST00000639890 871 ntTSL 5 BASIC10.34□□□□□ -0.75
P04436 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 MARCH8-202ENST00000395769 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 RBM24-201ENST00000318204 2394 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 CHRNA7-224ENST00000637183 2912 ntTSL 5 BASIC10.34□□□□□ -0.75
P04436 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 FKBP9P1-202ENST00000455909 2451 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
P04436 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC10.34□□□□□ -0.75
P04436 THAP5-201ENST00000313516 1568 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 TTLL3-202ENST00000383827 4834 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 VSTM5-202ENST00000409977 2969 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04436 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC10.34□□□□□ -0.75
P04436 BTG2-201ENST00000290551 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
P04436 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 LINC02211-203ENST00000642022 2816 ntBASIC10.34□□□□□ -0.75
P04436 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04436 ZCCHC11-202ENST00000355809 2152 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 JMJD7-PLA2G4B-202ENST00000382448 3331 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
P04436 PTCH2-203ENST00000447098 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 CCNYL2-201ENST00000472090 1440 ntBASIC10.33□□□□□ -0.76
P04436 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC10.33□□□□□ -0.76
P04436 REG4-202ENST00000354219 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 AC012368.1-206ENST00000451350 1504 ntTSL 5 BASIC10.33□□□□□ -0.76
P04436 ABR-201ENST00000291107 2673 ntTSL 2 BASIC10.33□□□□□ -0.76
P04436 DNM1L-230ENST00000553257 2699 ntTSL 2 BASIC10.33□□□□□ -0.76
P04436 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 GPR85-204ENST00000449591 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC10.33□□□□□ -0.76
P04436 SLC4A1-202ENST00000399246 3855 ntTSL 5 BASIC10.33□□□□□ -0.76
P04436 ZNF597-201ENST00000301744 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 MYO1F-222ENST00000613525 4296 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
P04436 PSMD1-201ENST00000308696 3326 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 RNA5SP370-201ENST00000362545 121 ntBASIC10.33□□□□□ -0.76
P04436 SNORA9B-201ENST00000384170 133 ntBASIC10.33□□□□□ -0.76
P04436 FAM153A-202ENST00000393518 1138 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
P04436 RN7SKP297-201ENST00000411270 282 ntBASIC10.33□□□□□ -0.76
P04436 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC10.33□□□□□ -0.76
P04436 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC10.33□□□□□ -0.76
P04436 AC008268.1-201ENST00000425887 1119 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04436 HSPB1-202ENST00000429938 527 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms