RNA–Protein interactions for RNA: ENST00000457177.5

ZNF550-205, Transcript of zinc finger protein 550, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZNF550, Length 3,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-205ENST00000457177 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
ZNF550-205ENST00000457177 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
ZNF550-205ENST00000457177 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
ZNF550-205ENST00000457177 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
ZNF550-205ENST00000457177 EHMT2Q96KQ7 1210 aa19.78■□□□□ 0.76
ZNF550-205ENST00000457177 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
ZNF550-205ENST00000457177 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
ZNF550-205ENST00000457177 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
ZNF550-205ENST00000457177 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
ZNF550-205ENST00000457177 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
ZNF550-205ENST00000457177 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
ZNF550-205ENST00000457177 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.69
ZNF550-205ENST00000457177 HRCP23327 699 aa19.22■□□□□ 0.67
ZNF550-205ENST00000457177 CCDC180Q9P1Z9 1646 aa19.18■□□□□ 0.66
ZNF550-205ENST00000457177 TRIM41Q8WV44 630 aa19.12■□□□□ 0.65
ZNF550-205ENST00000457177 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
ZNF550-205ENST00000457177 ABCC9O60706 1549 aa18.98■□□□□ 0.63
ZNF550-205ENST00000457177 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
ZNF550-205ENST00000457177 TRIM26Q12899 539 aaPredicted RBP18.8■□□□□ 0.6
ZNF550-205ENST00000457177 RSF1Q96T23 1441 aaPredicted RBP18.71■□□□□ 0.59
ZNF550-205ENST00000457177 RANGAP1P46060 587 aaPredicted RBP18.6■□□□□ 0.57
ZNF550-205ENST00000457177 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
ZNF550-205ENST00000457177 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.57
ZNF550-205ENST00000457177 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
ZNF550-205ENST00000457177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.53■□□□□ 0.56
ZNF550-205ENST00000457177 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
ZNF550-205ENST00000457177 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
ZNF550-205ENST00000457177 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
ZNF550-205ENST00000457177 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
ZNF550-205ENST00000457177 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
ZNF550-205ENST00000457177 WIZO95785 1651 aa18.19■□□□□ 0.5
ZNF550-205ENST00000457177 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
ZNF550-205ENST00000457177 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
ZNF550-205ENST00000457177 YTHDC1Q96MU7 727 aaKnown RBP18.05■□□□□ 0.48
ZNF550-205ENST00000457177 NACADO15069 1562 aa18.04■□□□□ 0.48
ZNF550-205ENST00000457177 SOGA1O94964 1423 aa18.03■□□□□ 0.48
ZNF550-205ENST00000457177 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
ZNF550-205ENST00000457177 CSRNP3Q8WYN3 585 aa18.02■□□□□ 0.47
ZNF550-205ENST00000457177 APLP2Q06481 763 aa17.95■□□□□ 0.46
ZNF550-205ENST00000457177 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
ZNF550-205ENST00000457177 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
ZNF550-205ENST00000457177 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
ZNF550-205ENST00000457177 ITGAEP38570 1179 aa17.87■□□□□ 0.45
ZNF550-205ENST00000457177 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
ZNF550-205ENST00000457177 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
ZNF550-205ENST00000457177 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
ZNF550-205ENST00000457177 ATP1B4Q9UN42 357 aaPredicted RBP17.76■□□□□ 0.43
ZNF550-205ENST00000457177 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
ZNF550-205ENST00000457177 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
ZNF550-205ENST00000457177 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
ZNF550-205ENST00000457177 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
ZNF550-205ENST00000457177 ACIN1Q9UKV3 1341 aaKnown RBP17.65■□□□□ 0.42
ZNF550-205ENST00000457177 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
ZNF550-205ENST00000457177 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
ZNF550-205ENST00000457177 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
ZNF550-205ENST00000457177 ZNF316A6NFI3 1004 aaPredicted RBP17.6■□□□□ 0.41
ZNF550-205ENST00000457177 P3H3Q8IVL6 736 aa17.59■□□□□ 0.41
ZNF550-205ENST00000457177 CLIP1P30622 1438 aa17.58■□□□□ 0.4
ZNF550-205ENST00000457177 MIER1Q8N108 512 aa17.56■□□□□ 0.4
ZNF550-205ENST00000457177 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
ZNF550-205ENST00000457177 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
ZNF550-205ENST00000457177 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
ZNF550-205ENST00000457177 RAPGEF2Q9Y4G8 1499 aa17.47■□□□□ 0.39
ZNF550-205ENST00000457177 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
ZNF550-205ENST00000457177 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
ZNF550-205ENST00000457177 FAM50AQ14320 339 aaKnown RBP17.39■□□□□ 0.37
ZNF550-205ENST00000457177 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
ZNF550-205ENST00000457177 EEA1Q15075 1411 aa17.38■□□□□ 0.37
ZNF550-205ENST00000457177 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
ZNF550-205ENST00000457177 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
ZNF550-205ENST00000457177 BICRAQ9NZM4 1560 aa17.35■□□□□ 0.37
ZNF550-205ENST00000457177 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
ZNF550-205ENST00000457177 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
ZNF550-205ENST00000457177 ARID3CA6NKF2 412 aa17.29■□□□□ 0.36
ZNF550-205ENST00000457177 SIN3AQ96ST3 1273 aa17.19■□□□□ 0.34
ZNF550-205ENST00000457177 PELP1Q8IZL8 1130 aaKnown RBP17.18■□□□□ 0.34
ZNF550-205ENST00000457177 BCANQ96GW7 911 aa17.18■□□□□ 0.34
ZNF550-205ENST00000457177 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
ZNF550-205ENST00000457177 KIF21BO75037 1637 aa17.14■□□□□ 0.33
ZNF550-205ENST00000457177 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
ZNF550-205ENST00000457177 DDX10Q13206 875 aaKnown RBP17.12■□□□□ 0.33
ZNF550-205ENST00000457177 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
ZNF550-205ENST00000457177 CUX2O14529 1486 aa17.09■□□□□ 0.33
ZNF550-205ENST00000457177 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
ZNF550-205ENST00000457177 DHX57Q6P158 1386 aaKnown RBP17.07■□□□□ 0.32
ZNF550-205ENST00000457177 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.32
ZNF550-205ENST00000457177 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.31
ZNF550-205ENST00000457177 CARMIL1Q5VZK9 1371 aa17■□□□□ 0.31
ZNF550-205ENST00000457177 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
ZNF550-205ENST00000457177 CUX1P39880 1505 aa16.99■□□□□ 0.31
ZNF550-205ENST00000457177 TRIM52Q96A61 297 aa16.97■□□□□ 0.31
ZNF550-205ENST00000457177 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
ZNF550-205ENST00000457177 IGF1RP08069 1367 aa16.95■□□□□ 0.3
ZNF550-205ENST00000457177 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
ZNF550-205ENST00000457177 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
ZNF550-205ENST00000457177 PEG3Q9GZU2 1588 aa16.91■□□□□ 0.3
ZNF550-205ENST00000457177 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
ZNF550-205ENST00000457177 FHOD3Q2V2M9 1422 aa16.91■□□□□ 0.3
ZNF550-205ENST00000457177 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.3
ZNF550-205ENST00000457177 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms