RNA–Protein interactions for RNA: ENST00000411270.1

RN7SKP297-201, Transcript of RNA, 7SK small nuclear pseudogene 297, humanhuman

BASIC

Gene RN7SKP297, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP297-201ENST00000411270 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
RN7SKP297-201ENST00000411270 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
RN7SKP297-201ENST00000411270 ZCCHC6Q5VYS8 1495 aaKnown RBP21.36■■□□□ 1.01
RN7SKP297-201ENST00000411270 DCAF1Q9Y4B6 1507 aa20.97■□□□□ 0.95
RN7SKP297-201ENST00000411270 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
RN7SKP297-201ENST00000411270 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
RN7SKP297-201ENST00000411270 MYO15BQ96JP2 1530 aa20.37■□□□□ 0.85
RN7SKP297-201ENST00000411270 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
RN7SKP297-201ENST00000411270 ABCC9O60706 1549 aa20.19■□□□□ 0.82
RN7SKP297-201ENST00000411270 HRCP23327 699 aa19.99■□□□□ 0.79
RN7SKP297-201ENST00000411270 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
RN7SKP297-201ENST00000411270 RSF1Q96T23 1441 aaPredicted RBP19.84■□□□□ 0.77
RN7SKP297-201ENST00000411270 NACADO15069 1562 aa19.81■□□□□ 0.76
RN7SKP297-201ENST00000411270 RB1CC1Q8TDY2 1594 aa19.79■□□□□ 0.76
RN7SKP297-201ENST00000411270 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
RN7SKP297-201ENST00000411270 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
RN7SKP297-201ENST00000411270 TRIM26Q12899 539 aaPredicted RBP19.49■□□□□ 0.71
RN7SKP297-201ENST00000411270 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
RN7SKP297-201ENST00000411270 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
RN7SKP297-201ENST00000411270 BAZ1AQ9NRL2 1556 aaPredicted RBP19.41■□□□□ 0.7
RN7SKP297-201ENST00000411270 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
RN7SKP297-201ENST00000411270 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
RN7SKP297-201ENST00000411270 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
RN7SKP297-201ENST00000411270 WIZO95785 1651 aa19.29■□□□□ 0.68
RN7SKP297-201ENST00000411270 ZEB1P37275 1124 aaPredicted RBP19.28■□□□□ 0.68
RN7SKP297-201ENST00000411270 TOP2AP11388 1531 aaKnown RBP19.19■□□□□ 0.66
RN7SKP297-201ENST00000411270 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
RN7SKP297-201ENST00000411270 SMARCA4P51532 1647 aa19.13■□□□□ 0.65
RN7SKP297-201ENST00000411270 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
RN7SKP297-201ENST00000411270 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
RN7SKP297-201ENST00000411270 WRNQ14191 1432 aaPredicted RBP eCLIP19■□□□□ 0.63
RN7SKP297-201ENST00000411270 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
RN7SKP297-201ENST00000411270 EEA1Q15075 1411 aa18.95■□□□□ 0.62
RN7SKP297-201ENST00000411270 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
RN7SKP297-201ENST00000411270 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
RN7SKP297-201ENST00000411270 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
RN7SKP297-201ENST00000411270 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
RN7SKP297-201ENST00000411270 DNAJC5BQ9UF47 199 aa18.78■□□□□ 0.6
RN7SKP297-201ENST00000411270 ABCC8Q09428 1581 aa18.77■□□□□ 0.6
RN7SKP297-201ENST00000411270 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
RN7SKP297-201ENST00000411270 KIF21BO75037 1637 aa18.68■□□□□ 0.58
RN7SKP297-201ENST00000411270 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
RN7SKP297-201ENST00000411270 SOGA1O94964 1423 aa18.63■□□□□ 0.57
RN7SKP297-201ENST00000411270 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
RN7SKP297-201ENST00000411270 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
RN7SKP297-201ENST00000411270 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
RN7SKP297-201ENST00000411270 ATAD2BQ9ULI0 1458 aa18.53■□□□□ 0.56
RN7SKP297-201ENST00000411270 SYNJ1O43426 1573 aa18.53■□□□□ 0.56
RN7SKP297-201ENST00000411270 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
RN7SKP297-201ENST00000411270 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
RN7SKP297-201ENST00000411270 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
RN7SKP297-201ENST00000411270 TOP2BQ02880 1626 aa18.44■□□□□ 0.54
RN7SKP297-201ENST00000411270 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
RN7SKP297-201ENST00000411270 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
RN7SKP297-201ENST00000411270 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
RN7SKP297-201ENST00000411270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
RN7SKP297-201ENST00000411270 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
RN7SKP297-201ENST00000411270 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
RN7SKP297-201ENST00000411270 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
RN7SKP297-201ENST00000411270 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
RN7SKP297-201ENST00000411270 CLIP1P30622 1438 aa18.32■□□□□ 0.52
RN7SKP297-201ENST00000411270 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
RN7SKP297-201ENST00000411270 PRXQ9BXM0 1461 aa18.26■□□□□ 0.51
RN7SKP297-201ENST00000411270 UBTFP17480 764 aaKnown RBP18.25■□□□□ 0.51
RN7SKP297-201ENST00000411270 ACIN1Q9UKV3 1341 aaKnown RBP18.24■□□□□ 0.51
RN7SKP297-201ENST00000411270 RAPGEF2Q9Y4G8 1499 aa18.23■□□□□ 0.51
RN7SKP297-201ENST00000411270 DIEXFQ68CQ4 756 aaKnown RBP18.21■□□□□ 0.51
RN7SKP297-201ENST00000411270 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
RN7SKP297-201ENST00000411270 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
RN7SKP297-201ENST00000411270 ZNF316A6NFI3 1004 aaPredicted RBP18.15■□□□□ 0.5
RN7SKP297-201ENST00000411270 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
RN7SKP297-201ENST00000411270 CUX2O14529 1486 aa18.11■□□□□ 0.49
RN7SKP297-201ENST00000411270 CFTRP13569 1480 aa18.11■□□□□ 0.49
RN7SKP297-201ENST00000411270 CUX1P39880 1505 aa18.1■□□□□ 0.49
RN7SKP297-201ENST00000411270 ARAP1Q96P48 1450 aa18.1■□□□□ 0.49
RN7SKP297-201ENST00000411270 NEUROD1Q13562 356 aa18.06■□□□□ 0.48
RN7SKP297-201ENST00000411270 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
RN7SKP297-201ENST00000411270 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
RN7SKP297-201ENST00000411270 KIF27Q86VH2 1401 aa18.03■□□□□ 0.48
RN7SKP297-201ENST00000411270 APLP2Q06481 763 aa17.96■□□□□ 0.47
RN7SKP297-201ENST00000411270 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
RN7SKP297-201ENST00000411270 ARHGAP35Q9NRY4 1499 aa17.91■□□□□ 0.46
RN7SKP297-201ENST00000411270 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
RN7SKP297-201ENST00000411270 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
RN7SKP297-201ENST00000411270 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
RN7SKP297-201ENST00000411270 TIAM1Q13009 1591 aa17.83■□□□□ 0.44
RN7SKP297-201ENST00000411270 CFAP43Q8NDM7 1665 aa17.8■□□□□ 0.44
RN7SKP297-201ENST00000411270 IGF1RP08069 1367 aa17.79■□□□□ 0.44
RN7SKP297-201ENST00000411270 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
RN7SKP297-201ENST00000411270 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
RN7SKP297-201ENST00000411270 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
RN7SKP297-201ENST00000411270 MIER1Q8N108 512 aa17.75■□□□□ 0.43
RN7SKP297-201ENST00000411270 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
RN7SKP297-201ENST00000411270 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.43
RN7SKP297-201ENST00000411270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.72■□□□□ 0.43
RN7SKP297-201ENST00000411270 EFCAB5A4FU69 1503 aa17.71■□□□□ 0.43
RN7SKP297-201ENST00000411270 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
RN7SKP297-201ENST00000411270 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
RN7SKP297-201ENST00000411270 LRRC9Q6ZRR7 1453 aa17.69■□□□□ 0.42
RN7SKP297-201ENST00000411270 MYT1Q01538 1121 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms