Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SPCS1Q9Y6A9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SPCS1Q9Y6A9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
SPCS1Q9Y6A9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.65□□□□□ -0.07
SPCS1Q9Y6A9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 DYNLL1-208ENST00000550178 581 ntBASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 NEFHP1-201ENST00000412845 2629 ntBASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 ALDH1A3-203ENST00000557963 1670 ntBASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SPCS1Q9Y6A9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 AL133380.1-201ENST00000506013 324 ntBASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SPCS1Q9Y6A9 AC020916.1-201ENST00000587762 1774 ntBASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 AP000974.1-201ENST00000623909 2387 ntBASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 AC005332.8-201ENST00000622750 2735 ntBASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SPCS1Q9Y6A9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms