Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
CDC42BPBQ9Y5S2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC32.57■■■□□ 2.81
CDC42BPBQ9Y5S2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC32.57■■■□□ 2.8
CDC42BPBQ9Y5S2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC32.56■■■□□ 2.8
CDC42BPBQ9Y5S2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
CDC42BPBQ9Y5S2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CDC42BPBQ9Y5S2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
CDC42BPBQ9Y5S2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC32.53■■■□□ 2.8
CDC42BPBQ9Y5S2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDC42BPBQ9Y5S2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDC42BPBQ9Y5S2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC32.53■■■□□ 2.8
CDC42BPBQ9Y5S2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CDC42BPBQ9Y5S2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC32.53■■■□□ 2.8
CDC42BPBQ9Y5S2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC32.52■■■□□ 2.8
CDC42BPBQ9Y5S2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC32.52■■■□□ 2.8
CDC42BPBQ9Y5S2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CDC42BPBQ9Y5S2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CDC42BPBQ9Y5S2 UNC93B5-201ENST00000530315 699 ntBASIC32.52■■■□□ 2.8
CDC42BPBQ9Y5S2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC32.52■■■□□ 2.8
CDC42BPBQ9Y5S2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CDC42BPBQ9Y5S2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
CDC42BPBQ9Y5S2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC32.51■■■□□ 2.8
CDC42BPBQ9Y5S2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
CDC42BPBQ9Y5S2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC32.51■■■□□ 2.8
CDC42BPBQ9Y5S2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC32.51■■■□□ 2.79
CDC42BPBQ9Y5S2 AC243732.1-201ENST00000612648 864 ntBASIC32.51■■■□□ 2.79
CDC42BPBQ9Y5S2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC32.51■■■□□ 2.79
CDC42BPBQ9Y5S2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 AC008175.2-201ENST00000612840 297 ntBASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDC42BPBQ9Y5S2 AC087742.1-201ENST00000575880 1738 ntBASIC32.49■■■□□ 2.79
CDC42BPBQ9Y5S2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPBQ9Y5S2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPBQ9Y5S2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDC42BPBQ9Y5S2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC32.49■■■□□ 2.79
CDC42BPBQ9Y5S2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC32.49■■■□□ 2.79
CDC42BPBQ9Y5S2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 AC097658.1-201ENST00000475555 843 ntBASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 AC008694.1-202ENST00000636953 945 ntBASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 AC137767.1-201ENST00000602918 1920 ntBASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 AC006058.3-201ENST00000606217 1069 ntBASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC32.48■■■□□ 2.79
CDC42BPBQ9Y5S2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC32.47■■■□□ 2.79
CDC42BPBQ9Y5S2 POU5F1P4-201ENST00000413175 1085 ntBASIC32.47■■■□□ 2.79
CDC42BPBQ9Y5S2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC32.47■■■□□ 2.79
CDC42BPBQ9Y5S2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms