Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 AP001160.3-201ENST00000601484 763 ntBASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB2Q9Y5E7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 HLA-L-209ENST00000420110 1011 ntBASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 MFSD11-216ENST00000590393 1141 ntBASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB2Q9Y5E7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB2Q9Y5E7 AC092053.2-201ENST00000640557 1818 ntBASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 CROCCP5-201ENST00000436658 830 ntBASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 UBE2DNL-204ENST00000602536 740 ntBASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB2Q9Y5E7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 AP006587.3-201ENST00000525742 1516 ntBASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHB2Q9Y5E7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB2Q9Y5E7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
PCDHB2Q9Y5E7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 AC006970.2-201ENST00000450065 779 ntBASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB2Q9Y5E7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB2Q9Y5E7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms