Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 AC003102.1-202ENST00000563394 1796 ntBASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 LINC00565-201ENST00000562710 2331 ntBASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PCDHA6Q9UN73 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA6Q9UN73 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 IKBKGP1-201ENST00000612193 1073 ntBASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHA6Q9UN73 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHA6Q9UN73 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
PCDHA6Q9UN73 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA6Q9UN73 KRT87P-202ENST00000534226 1464 ntBASIC24.39■■□□□ 1.5
PCDHA6Q9UN73 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA6Q9UN73 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA6Q9UN73 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.39■■□□□ 1.5
PCDHA6Q9UN73 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.39■■□□□ 1.49
PCDHA6Q9UN73 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PCDHA6Q9UN73 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 FBXW4P1-201ENST00000426721 2239 ntBASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms