Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EBF1Q9UH73 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
EBF1Q9UH73 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EBF1Q9UH73 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
EBF1Q9UH73 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.67■■□□□ 1.06
EBF1Q9UH73 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.67■■□□□ 1.06
EBF1Q9UH73 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.67■■□□□ 1.06
EBF1Q9UH73 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.67■■□□□ 1.06
EBF1Q9UH73 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
EBF1Q9UH73 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EBF1Q9UH73 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
EBF1Q9UH73 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 AC092068.2-201ENST00000590491 1708 ntBASIC21.66■■□□□ 1.06
EBF1Q9UH73 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.66■■□□□ 1.06
EBF1Q9UH73 LINC00565-201ENST00000562710 2331 ntBASIC21.66■■□□□ 1.06
EBF1Q9UH73 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EBF1Q9UH73 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EBF1Q9UH73 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
EBF1Q9UH73 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EBF1Q9UH73 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
EBF1Q9UH73 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.65■■□□□ 1.06
EBF1Q9UH73 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.65■■□□□ 1.06
EBF1Q9UH73 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.65■■□□□ 1.06
EBF1Q9UH73 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
EBF1Q9UH73 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EBF1Q9UH73 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EBF1Q9UH73 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EBF1Q9UH73 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
EBF1Q9UH73 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EBF1Q9UH73 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EBF1Q9UH73 AC010141.2-201ENST00000452426 721 ntBASIC21.64■■□□□ 1.05
EBF1Q9UH73 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.64■■□□□ 1.05
EBF1Q9UH73 FAM201B-201ENST00000458407 597 ntBASIC21.64■■□□□ 1.05
EBF1Q9UH73 AC079089.2-201ENST00000531211 1277 ntBASIC21.64■■□□□ 1.05
EBF1Q9UH73 AC105036.2-201ENST00000569468 176 ntBASIC21.64■■□□□ 1.05
EBF1Q9UH73 AC138907.5-202ENST00000569484 235 ntBASIC21.64■■□□□ 1.05
EBF1Q9UH73 AC010536.3-201ENST00000620306 533 ntBASIC21.64■■□□□ 1.05
EBF1Q9UH73 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EBF1Q9UH73 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
EBF1Q9UH73 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
EBF1Q9UH73 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.63■■□□□ 1.05
EBF1Q9UH73 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
EBF1Q9UH73 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
EBF1Q9UH73 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
EBF1Q9UH73 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 MIR4651-201ENST00000582622 73 ntBASIC21.63■■□□□ 1.05
EBF1Q9UH73 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EBF1Q9UH73 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.63■■□□□ 1.05
EBF1Q9UH73 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
EBF1Q9UH73 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EBF1Q9UH73 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.62■■□□□ 1.05
EBF1Q9UH73 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EBF1Q9UH73 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EBF1Q9UH73 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.62■■□□□ 1.05
EBF1Q9UH73 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.62■■□□□ 1.05
EBF1Q9UH73 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.62■■□□□ 1.05
EBF1Q9UH73 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EBF1Q9UH73 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
EBF1Q9UH73 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.61■■□□□ 1.05
EBF1Q9UH73 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
EBF1Q9UH73 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EBF1Q9UH73 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.61■■□□□ 1.05
EBF1Q9UH73 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms