Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 DUX4L4-201ENST00000566884 1269 ntBASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 MIR7108-201ENST00000614319 87 ntBASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 AC019171.1-201ENST00000601251 1056 ntBASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD3Q9UBI1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD3Q9UBI1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.64■□□□□ 0.58
COMMD3Q9UBI1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 THA1P-201ENST00000590384 1145 ntBASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD3Q9UBI1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD3Q9UBI1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COMMD3Q9UBI1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms