Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CHMP4BQ9H444 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 AL358852.1-201ENST00000623174 1268 ntBASIC26.83■■□□□ 1.89
CHMP4BQ9H444 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHMP4BQ9H444 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 AC005224.4-201ENST00000583262 1652 ntBASIC26.82■■□□□ 1.88
CHMP4BQ9H444 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.82■■□□□ 1.88
CHMP4BQ9H444 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.82■■□□□ 1.88
CHMP4BQ9H444 AC055733.4-201ENST00000638462 1354 ntBASIC26.82■■□□□ 1.88
CHMP4BQ9H444 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.81■■□□□ 1.88
CHMP4BQ9H444 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.8■■□□□ 1.88
CHMP4BQ9H444 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 AC026310.3-201ENST00000625186 2373 ntBASIC26.79■■□□□ 1.88
CHMP4BQ9H444 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHMP4BQ9H444 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHMP4BQ9H444 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CHMP4BQ9H444 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CHMP4BQ9H444 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CHMP4BQ9H444 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.76■■□□□ 1.88
CHMP4BQ9H444 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CHMP4BQ9H444 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.75■■□□□ 1.87
CHMP4BQ9H444 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms