Protein–RNA interactions for Protein: Q9H0E9

BRD8, Bromodomain-containing protein 8, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8Q9H0E9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.81■■□□□ 1.08
BRD8Q9H0E9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 AC105265.2-201ENST00000467189 838 ntBASIC21.8■■□□□ 1.08
BRD8Q9H0E9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 AL358852.1-201ENST00000623174 1268 ntBASIC21.8■■□□□ 1.08
BRD8Q9H0E9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRD8Q9H0E9 AC005224.4-201ENST00000583262 1652 ntBASIC21.79■■□□□ 1.08
BRD8Q9H0E9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 AC055733.4-201ENST00000638462 1354 ntBASIC21.79■■□□□ 1.08
BRD8Q9H0E9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.79■■□□□ 1.08
BRD8Q9H0E9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.78■■□□□ 1.08
BRD8Q9H0E9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRD8Q9H0E9 Z98882.1-201ENST00000622160 2253 ntBASIC21.77■■□□□ 1.08
BRD8Q9H0E9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
BRD8Q9H0E9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
BRD8Q9H0E9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.76■■□□□ 1.07
BRD8Q9H0E9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 IRS3P-201ENST00000223076 1006 ntBASIC21.75■■□□□ 1.07
BRD8Q9H0E9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.75■■□□□ 1.07
BRD8Q9H0E9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms