Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AMBRA1Q9C0C7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 OR7E47P-201ENST00000546390 1422 ntBASIC19.85■□□□□ 0.77
AMBRA1Q9C0C7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 AC099791.2-201ENST00000605725 427 ntBASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AMBRA1Q9C0C7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.83■□□□□ 0.77
AMBRA1Q9C0C7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.83■□□□□ 0.76
AMBRA1Q9C0C7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.83■□□□□ 0.76
AMBRA1Q9C0C7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.83■□□□□ 0.76
AMBRA1Q9C0C7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
AMBRA1Q9C0C7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.82■□□□□ 0.76
AMBRA1Q9C0C7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AMBRA1Q9C0C7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 AC104564.3-201ENST00000582367 638 ntBASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
AMBRA1Q9C0C7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms