Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DUX4L6-201ENST00000626483 1275 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DUX4L1-201ENST00000627662 1275 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DUX4L8-201ENST00000629013 1275 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DUX4L3-201ENST00000630187 1275 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DUX4L7-201ENST00000630678 1275 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DUX4L5-201ENST00000630834 1275 ntBASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CCM2Q9BSQ5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.94■□□□□ 0.94
CCM2Q9BSQ5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCM2Q9BSQ5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCM2Q9BSQ5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 AC104564.3-201ENST00000582367 638 ntBASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCM2Q9BSQ5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 KRT87P-202ENST00000534226 1464 ntBASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.9■□□□□ 0.94
CCM2Q9BSQ5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
CCM2Q9BSQ5 LINC00565-201ENST00000562710 2331 ntBASIC20.89■□□□□ 0.94
CCM2Q9BSQ5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms