Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 PCDHAC2-203ENST00000615316 3011 ntBASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.72■□□□□ 0.59
NEDD4LQ96PU5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEDD4LQ96PU5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NEDD4LQ96PU5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 FP325331.1-202ENST00000623531 1380 ntBASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 AL031848.2-201ENST00000607670 837 ntBASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEDD4LQ96PU5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 MIR6722-201ENST00000617286 78 ntBASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.69■□□□□ 0.58
NEDD4LQ96PU5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NEDD4LQ96PU5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEDD4LQ96PU5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.66■□□□□ 0.58
NEDD4LQ96PU5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms