Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC46A1Q96NT5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 AC013268.1-206ENST00000638368 961 ntBASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 AC112229.1-201ENST00000639295 961 ntBASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 LINC01960-201ENST00000563759 1884 ntBASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SLC46A1Q96NT5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 SLC7A5P1-201ENST00000568957 537 ntBASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 ITM2C-210ENST00000620962 501 ntBASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SLC46A1Q96NT5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 TERF1P5-201ENST00000477545 1207 ntBASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC46A1Q96NT5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 KRT18P29-201ENST00000397031 1267 ntBASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 MIPEPP3-201ENST00000412105 444 ntBASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 AC079089.2-201ENST00000531211 1277 ntBASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 AC068338.2-201ENST00000563278 1430 ntBASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC46A1Q96NT5 AC068473.5-201ENST00000616428 2072 ntBASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 RNA5SP413-201ENST00000516373 109 ntBASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC46A1Q96NT5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC46A1Q96NT5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms