Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITCHQ96J02 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ITCHQ96J02 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ITCHQ96J02 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ITCHQ96J02 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ITCHQ96J02 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ITCHQ96J02 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITCHQ96J02 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.2■□□□□ 0.82
ITCHQ96J02 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.2■□□□□ 0.82
ITCHQ96J02 AL512631.2-201ENST00000604634 923 ntBASIC20.2■□□□□ 0.82
ITCHQ96J02 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ITCHQ96J02 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ITCHQ96J02 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITCHQ96J02 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ITCHQ96J02 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ITCHQ96J02 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ITCHQ96J02 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.19■□□□□ 0.82
ITCHQ96J02 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.19■□□□□ 0.82
ITCHQ96J02 AL138724.1-201ENST00000606771 1088 ntBASIC20.19■□□□□ 0.82
ITCHQ96J02 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ITCHQ96J02 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.18■□□□□ 0.82
ITCHQ96J02 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
ITCHQ96J02 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.18■□□□□ 0.82
ITCHQ96J02 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.18■□□□□ 0.82
ITCHQ96J02 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.18■□□□□ 0.82
ITCHQ96J02 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ITCHQ96J02 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
ITCHQ96J02 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.18■□□□□ 0.82
ITCHQ96J02 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ITCHQ96J02 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ITCHQ96J02 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ITCHQ96J02 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ITCHQ96J02 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ITCHQ96J02 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 AP004607.7-201ENST00000527152 1677 ntBASIC20.17■□□□□ 0.82
ITCHQ96J02 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ITCHQ96J02 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.17■□□□□ 0.82
ITCHQ96J02 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.17■□□□□ 0.82
ITCHQ96J02 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.17■□□□□ 0.82
ITCHQ96J02 DUX4L19-201ENST00000557448 1267 ntBASIC20.17■□□□□ 0.82
ITCHQ96J02 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.17■□□□□ 0.82
ITCHQ96J02 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ITCHQ96J02 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.17■□□□□ 0.82
ITCHQ96J02 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.17■□□□□ 0.82
ITCHQ96J02 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.17■□□□□ 0.82
ITCHQ96J02 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ITCHQ96J02 SYT6-210ENST00000641643 1587 ntBASIC20.17■□□□□ 0.82
ITCHQ96J02 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.17■□□□□ 0.82
ITCHQ96J02 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ITCHQ96J02 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ITCHQ96J02 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ITCHQ96J02 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ITCHQ96J02 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
ITCHQ96J02 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 AP005435.1-201ENST00000529293 1178 ntBASIC20.16■□□□□ 0.82
ITCHQ96J02 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ITCHQ96J02 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ITCHQ96J02 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ITCHQ96J02 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ITCHQ96J02 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ITCHQ96J02 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ITCHQ96J02 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.15■□□□□ 0.82
ITCHQ96J02 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ITCHQ96J02 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ITCHQ96J02 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ITCHQ96J02 SERBP1P1-201ENST00000396021 1160 ntBASIC20.15■□□□□ 0.82
ITCHQ96J02 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ITCHQ96J02 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms