Protein–RNA interactions for Protein: Q969L4

LSM10, U7 snRNA-associated Sm-like protein LSm10, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10Q969L4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LSM10Q969L4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM10Q969L4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.31■□□□□ 0.36
LSM10Q969L4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM10Q969L4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM10Q969L4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM10Q969L4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM10Q969L4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.31■□□□□ 0.36
LSM10Q969L4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM10Q969L4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM10Q969L4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LSM10Q969L4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LSM10Q969L4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LSM10Q969L4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM10Q969L4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM10Q969L4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM10Q969L4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM10Q969L4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LSM10Q969L4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.3■□□□□ 0.36
LSM10Q969L4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LSM10Q969L4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.3■□□□□ 0.36
LSM10Q969L4 AC087239.1-201ENST00000622671 572 ntBASIC17.3■□□□□ 0.36
LSM10Q969L4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.3■□□□□ 0.36
LSM10Q969L4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM10Q969L4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LSM10Q969L4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LSM10Q969L4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM10Q969L4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM10Q969L4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM10Q969L4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LSM10Q969L4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM10Q969L4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LSM10Q969L4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM10Q969L4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM10Q969L4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.29■□□□□ 0.36
LSM10Q969L4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM10Q969L4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM10Q969L4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM10Q969L4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.28■□□□□ 0.36
LSM10Q969L4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 GUSBP5-201ENST00000418136 578 ntBASIC17.28■□□□□ 0.36
LSM10Q969L4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM10Q969L4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.28■□□□□ 0.36
LSM10Q969L4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM10Q969L4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.28■□□□□ 0.36
LSM10Q969L4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.28■□□□□ 0.36
LSM10Q969L4 AL034346.1-201ENST00000568244 1277 ntBASIC17.28■□□□□ 0.36
LSM10Q969L4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 pRNA.6-201ENST00000610482 90 ntBASIC17.28■□□□□ 0.36
LSM10Q969L4 pRNA.5-201ENST00000612139 90 ntBASIC17.28■□□□□ 0.36
LSM10Q969L4 pRNA.11-201ENST00000618423 90 ntBASIC17.28■□□□□ 0.36
LSM10Q969L4 pRNA.13-201ENST00000619112 90 ntBASIC17.28■□□□□ 0.36
LSM10Q969L4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.28■□□□□ 0.36
LSM10Q969L4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LSM10Q969L4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LSM10Q969L4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
LSM10Q969L4 FEM1AP1-201ENST00000431297 1995 ntBASIC17.28■□□□□ 0.36
LSM10Q969L4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LSM10Q969L4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.28■□□□□ 0.36
LSM10Q969L4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LSM10Q969L4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.27■□□□□ 0.36
LSM10Q969L4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LSM10Q969L4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LSM10Q969L4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LSM10Q969L4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LSM10Q969L4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LSM10Q969L4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms