Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRUB1Q8WWH5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 AC079089.2-201ENST00000531211 1277 ntBASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 C17orf82-201ENST00000623772 1530 ntBASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB1Q8WWH5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 OXCT2P1-201ENST00000447263 1535 ntBASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 YBX1P4-201ENST00000392794 808 ntBASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB1Q8WWH5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRUB1Q8WWH5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 FEM1AP1-201ENST00000431297 1995 ntBASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRUB1Q8WWH5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 AL031602.1-201ENST00000633169 911 ntBASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.4■□□□□ 0.7
TRUB1Q8WWH5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms