Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 SPCS2P3-201ENST00000500401 656 ntBASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 FP325331.1-202ENST00000623531 1380 ntBASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM11BQ8TCY0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SMIM11BQ8TCY0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 AC087289.5-201ENST00000586076 3175 ntBASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 MIR6765-201ENST00000614092 87 ntBASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SMIM11BQ8TCY0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 AP005212.1-201ENST00000581547 1997 ntBASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SMIM11BQ8TCY0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SMIM11BQ8TCY0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC13.77□□□□□ -0.21
SMIM11BQ8TCY0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms