Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZSWIM2Q8NEG5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.23■■□□□ 1.31
ZSWIM2Q8NEG5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ZSWIM2Q8NEG5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.21■■□□□ 1.31
ZSWIM2Q8NEG5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
ZSWIM2Q8NEG5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 AC004854.2-201ENST00000608450 1441 ntBASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
ZSWIM2Q8NEG5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 AC079140.4-201ENST00000507448 529 ntBASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ZSWIM2Q8NEG5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms